Genevieve Buckley

Add example showing a simple 360 degree rotation

2

I think it would be useful to add [an example to the docs](https://github.com/napari/napari-animation/tree/main/examples) showing a simple 360 degree rotation. Ideally it should have a section at the beginning setting the...

Feature: GUI button to generate 360/180/etc. degree rotation

1

Suggested in https://github.com/napari/napari-animation/issues/164, a GUI button that allows users to easily add a 360 degree (or 180, or whatever) rotation to their animations. It's difficult to get an even, constant...

Maintenance: fix CI test errors

1

Code maintenance, fixing some errors that have popped up in the CI test suite. Mostly adjustments for code deprecation, and minor API changes in other libraries.

I think `chardet` needs to be added to the `requirements.txt`. It's used in `utils/metadata.py`, and I get an import error in the first cell of the `DaskFustion_Example.ipynb` notebook if chardet...

Closes https://github.com/computational-cell-analytics/micro-sam/issues/530 The napari-hub discovers napari plugins by scraping PyPI, looking for the napari framework classifier. When it finds a package with the napari classifier, it will automatically populate a...

Update release process and add release guide to developer documentation

2

Related to https://github.com/computational-cell-analytics/micro-sam/issues/242 I think the release process for micro-sam is a bit complicated (possibly because first things need to be merged from the `dev` branch to `main`, and then...

Investigate faster SAM implementations and consider changing the default model

8

I know there are a whole bunch of projects that popped up after segment-anything was released, but another one we might like to look at and potentially include is FastSAM:...

Test failure on macos-14 CI (M1 Mac, MPS torch backend): test_mps_batched_mask_to_box

2

Test `test_mps_batched_mask_to_box` fails on our `macos-14` CI. `tests/test_sam_annotator/test_vendored.py::TestVendored.test_mps_batched_mask_to_box` ```python-traceback =================================== FAILURES =================================== __________________ TestVendored.test_mps_batched_mask_to_box ___________________ self = @unittest.skipIf(not (torch.backends.mps.is_available() and torch.backends.mps.is_built()), "MPS Pytorch backend is not available") def test_mps_batched_mask_to_box(self): >...

napari reader for multiscale-spatial-image datasets

6

I came across the multiscale-spatial-image package recently, and like it a lot. I thought it would be handy for me to have a napari plugin that can read these and...

Trialling different parameters for orthoslice merging

2

Is there a good way to try out different parameters for combining orthoslice predictions into a single volume? I'd like to test a few different things without needing to re-run...