Genevieve Buckley

Results 99 issues of Genevieve Buckley

We might be able to use dask-histogram from @douglasdavis to add a bunch of global thresholding functions here. * Github repository: https://github.com/douglasdavis/dask-histogram * Documentation: https://dask-histogram.readthedocs.io/en/latest/?badge=latest

Hi @Zac-HD and @FudgeMunkey, We talked a while ago about whether it would be good to add property-based testing with hypothesis to dask-image. I'd like to suggest a good place...

We should have a table in the documentation explaining what has GPU array support and what doesn't. It could be similar to our table explaining function coverage in `dask-image` vs...

good first issue

It's probably a good idea if we add this info to our docs. Things that happen infrequently and have multiple steps are always a bit too easy to forget parts...

### dask-image example datasets We need some good example data for tutorials with dask-image. This issue is a place for discussion and suggestions. If you have links, add them here!...

This is a question about the API design for label indices in `dask_image.ndmeasure` functions. Where `labels` is given but `index` is None, the label array is overwritten and becomes a...

# Example data - Brain MRI dataset This great PR https://github.com/napari/tutorials/pull/64 to the napari tutorials was made by partners @DaliaAymanAmeen and Dina for their RGSOC application. They use a beautiful...

We want to use a histology slide image from the 2016 Camelyon dataset (CC0): https://camelyon17.grand-challenge.org/Data/ This thread contains details specific to this dataset. Related to the larger discussion here: https://github.com/dask/dask-image/issues/107

We want to implement a dask-image version of `scipy.ndimage.fourier_ellipsoid` ([see the docs here](https://docs.scipy.org/doc/scipy-0.19.0/reference/generated/scipy.ndimage.fourier_ellipsoid.html)). This is expected to be a little more difficult than the rest of the functions implemented in...

# Description This PR makes the experience of annotating labels layers much nicer. It adds a keybinding where you hold "F" to activate flood fill mode, and automatically deactivates when...

tests