BRAKER2 had stopped at the end of the process ?

[sunnyEV]

HI,

braker.pl --genome=Avscaffolds.spades.fasta --hints=prothint_augustus.gff --workingdir=brakergff_test --cores 10 BRAKER2 has run till this step -- fixing AUGUSTUS genes with in frame stop codons...

ERROR in file /home/sun/data/softwares/BRAKER-2.1.6/scripts/braker.pl at line 8334 Failed to execute: /home/sun/anaconda3/bin/python3 /DATA/Ecology/sun/softwares/evaluation/augustus-3.3.3/scripts/fix_in_frame_stop_codon_genes.py

I don't really understand why BRAKER2 has stopped, suggestions please.

It has generated most of the output files.

aug_hints.lst augustus.hints.aa augustus.hints.codingseq augustus.hints.gff augustus.hints.gtf augustus.hints.tmp.gtf bad_genes.lst braker.log downsample_traingenes.log ensure_min_n_training_genes.stdout errors etrain.bad.lst filterGenemark.stdout firstetraining.stdout firsttest.stdout fix_IFS_log_drvnhpoi fix_in_frame_stop_codon_genes_augustus.hints.log gbFilterEtraining.stdout GeneMark-EP GeneMark-EP.stdout genemark_evidence.gff genemark_hintsfile.gff genome.fa genome.fa.cidx genome_header.map genome_split getAnnoFastaFromJoingenes.augustus.hints_tmp.stdout good_genes.lst hintsfile.gff hints.job.lst nonred.loci.lst optimize_augustus.stdout secondetraining.stdout secondtest.stdout species tmp_drvnhpoi tmp_merge_hints.gff tmp_no_merge_hints.gff tmp_opt_Sp_2 train.ff.gb train.f.gb train.gb train.gb.test train.gb.train train.gb.train.test train.gb.train.train traingenes.good.fa traingenes.good.gtf traingenes.good.nr.fa traingenes.gtf what-to-cite.txt