Compiling with -DDEBUG causes test failures

[diekhans]

if augustus is compiled with -DDEBUG, a number of tests fail with errors such as:

Traceback (most recent call last):
  File "/hive/users/markd/compartiveGenomics/projs/cat/augustus/Augustus-master/tests/examples/testcases.py", line 339, in test_utr_on
    self.process([
  File "/hive/users/markd/compartiveGenomics/projs/cat/augustus/Augustus-master/tests/examples/testcases.py", line 318, in process
    self.assertEqual(error, '', error)
AssertionError: 'Warning: Sum of all terminal probabilitie[3756 chars]s.\n' != ''
Diff is 3851 characters long. Set self.maxDiff to None to see it. : Warning: Sum of all terminal probabilities is 1 + delta, delta=-0.018. Not equal to 1.
Warning: Sum of transition probabilities out of state 25 is 1 + delta, delta=1. Not equal to 1.
2
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
Warning: Sum of transition probabilities out of state 28 is 1 + delta, delta=-0.98. Not equal to 1.
0.02
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.01, 0.01, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
Warning: Sum of transition probabilities out of state 31 is 1 + delta, delta=1. Not equal to 1.
2
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
Warning: Sum of transition probabilities out of state 34 is 1 + delta, delta=-0.98. Not equal to 1.
0.02
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.01, 0.01, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
Warning: Sum of transition probabilities out of state 63 is 1 + delta, delta=-0.98. Not equal to 1.
0.02
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.01, 0.01, 0, 0, 0, 0, 0, 0, 0, 0
Warning: Sum of transition probabilities out of state 64 is 1 + delta, delta=1. Not equal to 1.
2
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0
Warning: Sum of transition probabilities out of state 69 is 1 + delta, delta=-0.98. Not equal to 1.
0.02
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.01, 0.01, 0, 0
Warning: Sum of transition probabilities out of state 70 is 1 + delta, delta=1. Not equal to 1.
2
Transitions are: 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0
debug activated!
[1000][2000][3000][4000][5000][6000][7000][8000][9000]After viterbi: average load is 17.14461,
                      used are 13.91685 of 71 states.
globalThreshUsedCount=0
Viterbi Score: 1.74e-5512
ln         : -12691.3
Now we deleted the viterbi matrix.
have no gene with in-frame stop codon
At the end of findGenes: average load is 0,
                                used are 0 of 71 states.
                Forward: average load is -nan,
                                used are -nan of 71 states.
debug activated!
[1000][2000]After viterbi: average load is 17.70222,
                      used are 14.36903 of 71 states.
globalThreshUsedCount=0
Viterbi Score: 3.62e-1350
ln         : -3107.202
Now we deleted the viterbi matrix.
have no gene with in-frame stop codon
At the end of findGenes: average load is 0,
                                used are 0 of 71 states.
                Forward: average load is -nan,
                                used are -nan of 71 states.