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Published 20 hours ago • verified publisher icon GMOD

alignments2 - change track height in track menu

Open keiranmraine opened this issue 7 years ago • 6 comments

Is this on anyone's radar? I know it's a simple item to add directly

keiranmraine avatar Sep 28 '16 15:09 keiranmraine

To clarify in case a new contributor wants to take this on:

We'd like to add a "change height" item in the track menu for Alignments2 tracks that pops up the same track height changing dialog as the one used in the Wiggle/XYPlot tracks.

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rbuels avatar Jan 30 '18 21:01 rbuels

I am currently tackling this issue.

JJCSPR avatar Sep 20 '18 03:09 JJCSPR

@JJCSPR awesome :) I know developing the codebase itself isn't all that well documented so feel free to let us know if you have any issues. For example you will probably find it helpful to run from a git clone and use "npm run watch" after "setup.sh" to watch for changes you make in the codebase

cmdcolin avatar Sep 20 '18 11:09 cmdcolin

One of the best places to talk about JBrowse development is the JBrowse chat channel on Gitter: https://gitter.im/GMOD/jbrowse

All of the JBrowse core developers hang out in there.

On Thu, Sep 20, 2018 at 4:50 AM Colin Diesh [email protected] wrote:

@JJCSPR https://github.com/JJCSPR awesome :) I know developing the codebase itself isn't all that well documented so feel free to let us know if you have any issues. For example you will probably find it helpful to run from a git clone and use "npm run watch" after "setup.sh" to watch for changes you make in the codebase

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rbuels avatar Sep 20 '18 15:09 rbuels

@cmdcolin @rbuels thank you for the suggestions :) I'm about to get on a flight to Europe but I will get back to this as soon as I am settled.

JJCSPR avatar Sep 20 '18 16:09 JJCSPR

As noted in gitter probably the best thing to do is to look at the XYPlot's "Change track height". For Alignments2 you are probably looking to extend the maxHeight config variable since I am imaginging the reason for this feature would be if there is a very large read depth. Note that technically you could just make maxHeight very large in the config by default also but having this feature would enable end user to change this without admin intervention

cmdcolin avatar Oct 18 '18 19:10 cmdcolin