jbrowse
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bulk export
Run export on all the currently visible tracks, each exporting to a different file.
File -> Save visible region
Pop up a dialog box that looks like the single-track export, but has a table like:
Track name | Export format controls | File name
And then it generates and saves a bunch of files.
Credit idea to Valerie Wong in the release notes.
I second this feature request! Thanks, Colin
Should be possible to configure at track definition if this is permitted per track.
Issue #1265 had a request for a similar type of bulk export that I thought I'd lump here, which is exporting the sequences from multiple features in a region
I have a last question: the fasta export works on a smaller region but is there a way to get a kind of multi fasta with all the fasta sequences corresping to the tracks displayed in the highlight region ?
For example if I have 3 genes et 2 markers in my region of interest, I would like to download the 5 corresponding fasta sequences.
Thomas