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Gene spans track from maker2jbrowse error

Open cmdcolin opened this issue 3 years ago • 3 comments

From http://jbrowse.org/demos/yeast_pilon_jbrowse_datadir.tar.gz

Screenshot from 2020-09-24 12-25-07

cmdcolin avatar Sep 24 '20 16:09 cmdcolin

Appears to be related to the use of the --noSubfeatures flag

Results in attributes named "start" which has a stringified number on the feature so feature.get('start') returns a string

cmdcolin avatar Oct 23 '20 14:10 cmdcolin

@domenico-simone removing --noSubfeatures line from the bin/maker2jbrowse script can fix for now. See #1554 PR for a simple fix

Would need another investigation to completely figure out why noSubfeatures is non functional

cmdcolin avatar Oct 23 '20 14:10 cmdcolin

could also git bisect to find when if ever this was working :)

cmdcolin avatar Oct 23 '20 14:10 cmdcolin