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Add multi-sample 'matrix' display for multi-sample VCFs

Open cmdcolin opened this issue 1 year ago • 0 comments
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This is an older effort and is still in a bit under construction but could be useful to push forward

example image image

potential todos

  • label rows
  • sort rows
  • group rows
  • draw line from matrix position to genomic position, or just draw the lines at actual genomic position (these two use cases have different purposes)
  • minor allele frequency filter to filter out low freq variants

functionality is similar to multivariantviewer (jb1 plugin) and igv

image

https://www.youtube.com/watch?v=ZKwm8dqIQpg

cmdcolin avatar Aug 06 '24 02:08 cmdcolin