cram-js

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Remove dependency on long, abortable-promise-cache

2

This removes some dependencies on some packages The removal of abortable-promise-cache could change aborting behavior in a slight way: if multiple clients try to parseIndex, and one aborts, then all...

cmdcolin

Remove stat

1

This removes checks for "file out of bounds" to cram-js While the code is a bit "safer" perhaps with these checks, they require that "stat" works which requires specialized CORS...

cmdcolin

added getCigar method to record

8

added getCigar method to CramRecord, for example : record.getCigar() // "50S100M"

wilsonGen

Optimize the seqFetch for sparse CRAM file

3

@jrobinso Reported that a CRAM file with very few reads could take longer than expected because it ended up fetching the entire chromosome

cmdcolin

No SNPs displayed when sequence is from 'b' tag

2

This is a follow up from the previous issue of #34 Currently when large blocks of sequence are loaded from 'b', we don't have SNPs in this file. I don't...

cmdcolin

Should be able to pass an AbortSignal object to many of these calls to get them to abort.

rbuels