JBrowseR
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GMOD
R interface to the JBrowse 2 Linear Genome View.
Hello, Thank you for this nice tool. Is there a way to change the display of the tracks by using the functions assembly(), track_feature(), track_alignments(), default_session(), or at least a...
When I tried to use my local .gff file in shiny, I got this error. And I found that the detail about the output.gff track is config.type FeatureTrack config.trackId GRCh38_output...
hello, Thank you for developing this tool！ The error looks like: `Error: HTTP 200(OK) when fetching hg38.fa.gz.gzi ....( should be 206 for range requests)` how could I solve it? Thanks.
Hi, thanks for this excellent software. I have a genome browser working with JBrowseR but when I configure session in the JSON file, the code reports an error：Warning: `bindFillRole()` only...
Currently the "default_session helper" is used for opening tracks by default. however, this doesn't necessarily translate to the config.json scenario cleanly. could add extra helpers, or figure out a good...
message >Warning: bindFillRole() only works on htmltools::tag() objects (e.g., div(), p(), etc.), not objects of type 'shiny.tag.list'. then shiny don't work not sure the effect but it would be good...
will potentially improve the 'blank screen' reporting of errors
hello, Thank you for developing this tool！ I had some problems when building my Genome browser, I wanted to create multiple tracks of the same type, such as bw files,...
Hi ! Is there a way to check if a file exists on the server from R ? I tried RCurl::url.exists methods which never end on a JBrowseR::serve_data server... `RCurl::url.exists("http://127.0.0.1:5000/19A0470_min.bam")`...
