Apollo icon indicating copy to clipboard operation
Apollo copied to clipboard

allow export of GO Annotations within GFF3

Open nathandunn opened this issue 8 years ago • 5 comments

The idea is to allow a user to write their own export class if they have a different version of GFF3, Chado, etc. and then have that available the Sequence Panel.

nathandunn avatar Jun 09 '16 19:06 nathandunn

The initial context was to allow the ability to add a Chado exporter for exporting protein sequences.

nathandunn avatar Jun 09 '16 19:06 nathandunn

FYI @satta

nathandunn avatar Jun 09 '16 19:06 nathandunn

From @cmungall

General intro http://geneontology.org/article/gaf-gpad-and-lego

Specs: http://www.geneontology.org/specifications/gpad/gpad-1_2.html

nathandunn avatar Jun 16 '16 01:06 nathandunn

From

On export the annotation ("GAF") file should include the user ID as well as the source.

nathandunn avatar Jun 20 '16 17:06 nathandunn

related to #154

nathandunn avatar Feb 08 '19 05:02 nathandunn