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Adding variant classifications
Hello,
I am using readMAF
to read in a csv file from the latest CCLE mutation files and noticed there were two classes that are not currently classified: Stop_Codon_Del, Stop_Codon_Ins (see warning message below).
Would it be possible to add these in the next release?
Warning message:
In mapMutationTypeToMutationClass(maf.df[, variant.class.col], mutation.type.to.class.df) :
Unknown variant classification: Stop_Codon_Del, Stop_Codon_Ins,
Best, Yuka