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Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.

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Hello, I would like to know where in your scripts you compute the interface clash indicator and whether your print it or not in output. Thank you in advance for...

1.According to this paper Buel, G.R., Walters, K.J. Can AlphaFold2 predict the impact of missense mutations on structure?. Nat Struct Mol Biol 29, 1–2 (2022). https://doi.org/10.1038/s41594-021-00714-2, AlphaFold2 does not perform...

Hello, is there anyone knows how to make a netcdf file grid change from (12784, 21, 43) to (12784, 21, 0)?

I'm trying to run a pair of two proteins with AF2complex,and it shows me this Error: ValueError: could not broadcast input array from shape (4,1419,37,3) into shape (4,1282,37,3) But I...