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SciWiki: Collective KnowledgeBase for Scientific Data and Use

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### URL of existing content (a rendered, sciwiki.fredhutch.org link) https://sciwiki.fredhutch.org/scicomputing/compute_environments/ ### Specific information requests or concerns, or specific region on page of content to refresh. - Add link to Erick's...

scientific computing
refresh content
doc-a-thon

**Proposed Domain** Probably need to reorganize a bit to actually put this in. Will maybe be part of the Data Generation OVerhaul? **Content Summary** Link out to here: http://hutchdatascience.org/code_review/ **Local...

new content
structural
fh-dasl
doc-a-thon

**Proposed Domain** Scientific Computing with an additional preface and link from Data Science **Content Summary** https://sciwiki.fredhutch.org/scicomputing/store_overview/ The table specific to the Hutch needs to stay here, BUT the context of...

scientific computing
new content
refresh content
content repair
fh-dasl

**Describe the problem* ``` ./docker-build.sh ... ... Using webrick 1.7.0 Bundle complete! 14 Gemfile dependencies, 99 gems now installed. Use `bundle info [gemname]` to see where a bundled gem is...

content repair
structural

### URL of existing content (a rendered, sciwiki.fredhutch.org link) https://sciwiki.fredhutch.org/hdc/hdc_training/ ### Specific information requests or concerns, or specific region on page of content to refresh. This page should get updated...

refresh content
data core

### URL of existing content (a rendered, sciwiki.fredhutch.org link) https://sciwiki.fredhutch.org/scicomputing/software_examples/ ### Specific information requests or concerns, or specific region on page of content to refresh. Are references and information here...

scientific computing
examples and tutorials
refresh content

It would be useful to have an index linking and describing the example repositories in the FHCC github organization.

scientific computing
examples and tutorials
community need

**R programming** Scientific Computing R page **User Installed packages with devtools::install_github()** Github is getting picky about anonymous downloads. `install_github()` can produce this error. ``` API rate limit exceeded for 140.107.222.79....

new content
doc-a-thon

**Proposed Domain** Somewhere in computing, next to the software page **Content Summary** We are finding issues with how modules are loaded with (sometimes) inconsistent results. This page would describe how...

scientific computing
new content

### URL of existing content (a rendered, sciwiki.fredhutch.org link) This page (https://sciwiki.fredhutch.org/scicomputing/compute_jobs/) describes srun as a tool for running interactive jobs, but it's not clear how this is different from...

scientific computing
refresh content
doc-a-thon