CausalDiscoveryToolbox icon indicating copy to clipboard operation
CausalDiscoveryToolbox copied to clipboard

pcalg and kpcalg not installed in docker image

Open lmz123321 opened this issue 2 years ago • 4 comments

Hi. I am using the cdt GPU docker image (nv-cdt and nv-cdt-dev) to run a PC algorithm.

After importing the cdt in python3, I use print(cdt.utils.R.RPackages), and it shows that pcalg and kpcalg are not installed (showing False values).

This causes the failure of createing a PC() object with an error output:

ImportError: R Package (k)pcalg/RCIT is not available. RCIT has to be installed from https://github.com/Diviyan-Kalainathan/RCIT

Plus: the cdt CPU docker image does NOT have this problem. Could you please update the GPU docker image ? Thx.

lmz123321 avatar Mar 13 '22 08:03 lmz123321

Did you manage to solve this issue? If yes, please assist. Thanks.

shahdhardn avatar Mar 27 '22 12:03 shahdhardn

@shahdhardn Sorry, I didn't find a solution for this problem.

I used CPU version cdt docker instead.

I am waiting the authors of cdt to offer a solution.

lmz123321 avatar Mar 27 '22 12:03 lmz123321

Hello,

Sorry for the delay, I'll update the image ASAP

Best, Diviyan

diviyank avatar Mar 28 '22 08:03 diviyank

We had some CICD issues that are being solved, sorry for the wait ! We should be good soon !

diviyank avatar Aug 13 '22 09:08 diviyank