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Add FCI/RFCI algorithms

Open renero opened this issue 3 years ago • 4 comments

It would be great to count on FCI and RFCI algorithms in the Toolbox, as part of the migration from R. I can help.

renero avatar May 28 '21 08:05 renero

Hello, Sure, any help is appreciated ! Please send pull requests our way :) Make sure to take account of the developer documentation available here: https://fentechsolutions.github.io/CausalDiscoveryToolbox/html/developer.html

Best regards, Diviyan

diviyank avatar May 28 '21 11:05 diviyank

@renero Hi, could you please recommend some Python/R implementations for FCI and RFCI? Thanks a lot.

lmz123321 avatar Jan 19 '22 03:01 lmz123321

I re-implemented a parallel version of FCI with some improvements, adding HSIC and GPR, but it's not ready yet to be shared. And I'm also planning to work on a Python version of RFCI. If interested in working together, we can start a separate repo to have FCI and RFCI implemented in Python.

renero avatar Jan 24 '22 10:01 renero

@renero Hi, could you please recommend some Python/R implementations for FCI and RFCI? Thanks a lot.

Hi, just to share a python implementation for FCI: https://github.com/cmu-phil/causal-learn. We've optimized it and it might be faster than most R/Java implementations :)

kunwuz avatar Jan 28 '22 04:01 kunwuz