Bismark
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Error running bismark_genome_preparation
I am running:
bismark_genome_preparation --path_to_aligner /my_path/bowtie2-2.5.0-mingw-x86_64/bowtie2-2.5.0-mingw-x86_64/ --verbose /my_path/RRBS/
And I get the following output just after step III launches:
bowtie2-build-s does not exist, try running `[g]make bowtie2-build-s' Parent process: Failed to build index
Could you help?
Thanks Chris