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comprehensive dated seed plants made with genbank and opentree

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Hong Qian pointed out these non-monophyletic families. Peraceae Euphorbiaceae Picrodendraceae Fabaceae Polygalaceae Hydrangeaceae Lamiaceae Paulowniaceae Scrophulariaceae Oleaceae Lamiaceae Apocynaceae Gentianaceae Scrophulariaceae Apiaceae Araliaceae Primulaceae Hydrangeaceae Molluginaceae Balanophoraceae Santalaceae Hypoxidaceae Orchidaceae...

Phyllites_yallournensis Phyllites_gregorii Phyllites_juglarsdicoites Phyllites_fuccinervis These were identified by Hong Qian

need to check on Navia, Brewcaria, Sequencia in Navioideae (comments from T. Givnish)

In the aln and tre files, everything has some sort of index. How can I translate these into species names?