Erik Poppleton

For what it's worth, I was able to reproduce the error with oxpy returning [x, x, x] from `nucA.backbone_site()` only in virtual environments, but not when I install it in...

Sorry Lorenzo, I completely missed that request, but I figured it out! I don't know why yet, but the error is caused by the change to Numpy 2.0. Here's my...

Updating pybind11 to [2.13](https://github.com/pybind/pybind11/releases/tag/v2.13.6) seems to have fixed it for me. I didn't have any compilation problems just replacing the whole pybind11 folder with the new version, regardless of whether...

I'm going to go ahead and close this because I'm pretty sure the pull request fixed this issue. But please open a new one if you run into any new...

Thanks for the tag. Sound like Molecular Nodes is loading the whole trajectory into memory instead of splitting it up. One thing you can do is use oxDNA Analysis Tools'...