Eduardo Eyras

Thanks for your message, can you provide more details of how many samples you are comparing? and which comparison method? I am wondering whether it is a memory issue Thanks...

Have you tried without the -c option? Just wondering whether the -c is trying to keep too many things in memory. The empirical method can run very quickly out of...

Thanks for pointing this out I'll make a note for the time being. But I think it will be good to have it as well best Eduardo On Sat, 12...

Hi Hugo, sorry for the delay in the reply. The error you got could be common if your expression file is truncated or there are transcripts from the event file...

Hi, yes, the wiki is self-contained The data used is the one provided best E. On Wed, 11 May 2022 at 01:29, Hugo L. Ávila ***@***.***> wrote: > Tks for...

Hi Stephan, Thanks a lot for adding SUPPA to the galaxy toolshed and for your comments and suggestions. I'll go through them with JL and JC, who developed SUPPA and...

Hi Stephan, apologies for the long delay in replying We are really glad that you want to include SUPPA wrapper in galaxy. Regarding your questions: > > > 1. >...

Hi, this seems to have been fixed in the master. It might not have been updated in the conda installation. Have you tried with the master version of the code?...

Do your nan's appear as "nan" in the file? Please send me some examples of your files so that I can run the command and test it (eduardo.eyras at anu.edu.au)...

Hi Matt, I'm glad that you like it. Yes, it could be generated when the events are calculated, and it would be added to the ioe to link it to...