Eduardo Eyras

I cc Marina in case she can indicate what could be the cause of this ribomap issue E. On Wed, 30 Mar 2022 at 21:39, Noah Yu Zhang ***@***.***> wrote:...

Hi Josh, Thanks a lot for your enthusiasm! They do work indeed! We are applying the CHEUI models to many species, including bacteria. Please let us know how it goes...

Hi Pan, thanks for your email On Wed, 6 Mar 2024 at 21:35, panagi0tis90 ***@***.***> wrote: > Dear authors, > Thank you for the useful software. I am facing 2...

Hi Bai, Did you use any cut-off for the probability? You can change that to get more predictions. I hope this helps Eduardo On Sat, 14 Oct 2023 at 19:10,...

Hi, Thanks for the email. The position is the coordinate (half-open) of the 9-mer in the transcript where the prediction is made. That is, if the number is NNNNANNNN and...

Hi, yes, Please have a look at our tool https://github.com/comprna/R2Dtool Here is the preprint https://www.biorxiv.org/content/10.1101/2022.09.23.509222v1 I cc AJ who wrote the software Please let us know if you have any...

Hi Pan, We have new models for the R004 data. We are hoping to make them available soon Thanks Eduardo On Thu, 28 Mar 2024 at 23:55, Pan9001 ***@***.***> wrote:...

Hi, Thanks for your message. Could you please send us a copy of your command line? Thanks Eduardo On Fri, 21 Jul 2023 at 15:58, Proy321 ***@***.***> wrote: > I...

Sorry, I just saw it at the bottom of the page *python3 ../scripts/CHEUI_predict_model2.py -i read_level_m6A_predictions_sorted.txt -m ../CHEUI_trained_models/CHEUI_m6A_model2.h5 -o site_level_m6A_predictions.txt* The command looks ok to me. There seems to be an...

Thanks for your email This might be a problem with TensorFlow I cc Akanksha who may be able to help with this Thanks Eduardo On Fri, 21 Jul 2023 at...