ols4
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EBISPOT
Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)
PECO team has fixed the format issue here (https://github.com/Planteome/plant-experimental-conditions-ontology/issues/138). Tested locally and its working fine now.
**Describe the bug** When this endpoint is used for the search: https://www.ebi.ac.uk/ols4/api/search?q=data&start=0&groupField=iri&rows=10 There is no facet count data (it only has the search results) **To Reproduce** call https://www.ebi.ac.uk/ols4/api/search?q=data&start=0&groupField=iri&rows=10 **Expected behavior**...
https://www.ebi.ac.uk/ols4/api/v2/ontologies/idocovid19/properties/http%253A%252F%252Fwww.geneontology.org%252Fformats%252FoboInOwl%2523hasDbXref "curie" : "hasDbXref", "definedBy" : [ "oio" ], I think the curie should be `oio:hasDbXref`. The above link is to the v2 api to show the issue in the...
The page loads, but the tree view is still processing; the page turns blank. Some examples: https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0001012 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0010853 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000144 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0006801 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0004411
**Describe the bug** If you type too quickly in the ontology search filter it does not work **To Reproduce** Go to https://www.ebi.ac.uk/ols4/ontologies Type the name of an ontology eg "efo"....
**Describe the bug** The version 1 endpoint for ontology metadata is missing some fields such as License and Creators (contributor in v2) https://www.ebi.ac.uk/ols4/api/ontologies/agro **To Reproduce** https://www.ebi.ac.uk/ols4/api/ontologies/agro **Expected behavior** Not exactly...
**Describe the bug** The call to fetch the children for a term in the term tree returns 500. **To Reproduce** Examples: https://www.ebi.ac.uk/ols4/api/ontologies/agro/terms/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FPCO_0000031/jstree/children/3 https://www.ebi.ac.uk/ols4/api/ontologies/ngbo/terms/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FBFO_0000001/jstree/children/0 https://www.ebi.ac.uk/ols4/api/ontologies/agro/properties/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FRO_0000053/jstree/children/3 **Expected behavior** Legacy API calls should...
**Describe the bug** There is an inconsistency with the term label metadata type. Sometimes it is a String and sometimes it is a list. **To Reproduce** https://www.ebi.ac.uk/ols4/api/v2/ontologies/agro/classes?hasDirectParent=false&size=1000&lang=en&includeObsoleteEntities=false The term "entity"...