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EBISPOT
GWAS Catalog Ontology and Curation Infrastructure
1. The submission needs to be deleted as the studies used in this submission are used in another submission (GCP000799) 2. After deleting the submission, the following GCSTs (in the...
Some of the metadata in the yaml file for these two studies does not match submitted data: GCST90446169 GCST90446168 yamls: [GCST90446168-yaml.txt](https://api.zenhub.com/attachedFiles/eyJfcmFpbHMiOnsibWVzc2FnZSI6IkJBaHBBMlRNQnc9PSIsImV4cCI6bnVsbCwicHVyIjoiYmxvYl9pZCJ9fQ==--dd911e8b12cee74d49cfc565691b5b7f1718fbb4/GCST90446168-yaml.txt) [GCST90446169-yaml.txt](https://api.zenhub.com/attachedFiles/eyJfcmFpbHMiOnsibWVzc2FnZSI6IkJBaHBBMmJNQnc9PSIsImV4cCI6bnVsbCwicHVyIjoiYmxvYl9pZCJ9fQ==--8bed0c9885cadcfc9af4a209a763b0da0e279c50/GCST90446169-yaml.txt) E.g., the author notes differ between both yamls...
Since the beginning of the week, curators have noticed an error when creating PMID submissions: 'Error: invalid CORS request'. eg: Page does not automatically re-route to the created submission page...
As a curator, I want to be able to remove an EFO term from the list of terms in depo-curation when that term is no longer supposed to be used...
Submitters need a validator for top associations that can be run independently of the deposition app. This should be based on the slimmed down template specified in https://app.zenhub.com/workspaces/gwas-59df823c4a6feb3786810391/issues/gh/ebispot/xgwas-curator-tasks/39
Document every step of DR - what it does - where it runs - what happens to each data component - publication, study, associations, trait etc - with a view...
Submission id '67b4c247907bc3000139a071' User submission was pushed through validation for 3 out of 6 studies. Three studies should have non-GWAS-SSF file_type: GCST90551887 GCST90551888 GCST90551889 Three studies should have GWAS-SSF file-type:...
It is currently possible for a file to pass validation if it has >100K variants on a single chromosome, e.g. a fine mapping study. The validator should account for this...