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EBISPOT
GWAS Catalog Ontology and Curation Infrastructure
- [x] Release & test event tracking feature in sandbox @sajo-ebi & curators see gwas-curation-ui#137 - [x] Fix bug with bulk trait upload in sandbox @sajo-ebi see goci#1354 - [x]...
Discussion with Open Targets on adding us as user in their group. Need to ensure we can publish harmonised files to our ftp.
From the 'Update and obsolete EFO job report' e-mail on 17 May 2024, 20 terms were obsolete. I have deleted some which were not in use in the Catalog, and...
Nick needs access to the depo-curation app. I will share his account details via Slack. This should be done asap so he can start using the new features.
Related to ticket https://app.zenhub.com/workspaces/gwas-59df823c4a6feb3786810391/issues/gh/ebispot/xgwas-curator-tasks/26 PMID 30104761 is closed for submission as it was originally curated through the Curation App. Please change the status to 'open for submission' so that I...
The traits in the UI are correct, but the yaml files still have old traits and need to be updated. Total 233 studies.
All the studies associated with PMID 36635386 (4443 studies; GCST90199621 - GCST90204063; `63f8add57325c20001210db7`) can be found in the [pre-pub table](https://www.ebi.ac.uk/gwas/downloads/summary-statistics) even though they are published in the Catalog. They should...
GxE study status should be indicated on each study page e.g. https://www.ebi.ac.uk/gwas/studies/GCST004800. This could be presented alongside “Full summary statistics” and “Terms/License”. Could be yes/no or would be nice to...
All v2 and v3 studies downloads should have an additional column indicating GxE yes or no. Background info: GxE status is entered in the studies tab of the submission template.