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Replace obsolete EFO IDs with new MONDO equivalents

Open eks-ebi opened this issue 2 years ago • 1 comments

A user has pointed out some EFO terms are showing the prefix "obsolete" in the Search UI. This is because they have been made obsolete in EFO in favour of equivalent terms from MONDO (see EFO ticket https://github.com/EBISPOT/efo/issues/1750).

Task:

Replace the following EFO IDs with their MONDO equivalents. The trait name can remain unchanged.

cancer: http://www.ebi.ac.uk/efo/EFO_0000311 --> http://purl.obolibrary.org/obo/MONDO_0004992

coronary stenosis: http://www.ebi.ac.uk/efo/EFO_1000882 --> http://purl.obolibrary.org/obo/MONDO_0006715,

glaucoma: http://www.ebi.ac.uk/efo/EFO_0000516 --> http://purl.obolibrary.org/obo/MONDO_0005041

bipolar disorder: http://www.ebi.ac.uk/efo/EFO_0000289 --> http://purl.obolibrary.org/obo/MONDO_0004985

systemic lupus erythematosus: http://www.ebi.ac.uk/efo/EFO_0002690 --> http://purl.obolibrary.org/obo/MONDO_0007915

cognitive disorder: http://www.ebi.ac.uk/efo/EFO_1001457 --> http://purl.obolibrary.org/obo/MONDO_0002039

eks-ebi avatar Nov 21 '22 10:11 eks-ebi

mentioned in this ticket

ljwh2 avatar Nov 22 '22 09:11 ljwh2

To work on w/c 3rd Jan

ljwh2 avatar Dec 21 '22 11:12 ljwh2

Close after DR

ljwh2 avatar Jan 25 '23 11:01 ljwh2