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Documentation on curation utility scripts needs updating after SLURM migraton

Open ljwh2 opened this issue 1 year ago • 1 comments

Curators have several scripts that are used routinely, documented here: https://www.ebi.ac.uk/seqdb/confluence/display/GOCI/Using+the+Codon+Cluster

This page needs updating with any changes to usage following the migration to SLURM.

ljwh2 avatar Feb 07 '24 15:02 ljwh2

Please check with @earlEBI if clarification is needed

ljwh2 avatar May 02 '24 10:05 ljwh2

Updated the Confluence page.

  • Updated the commands
  • Updated login method
  • Updated scrontab
  • Updated the code how to run scripts

Please let me know if it looks good @earlEBI

karatugo avatar Jun 19 '24 12:06 karatugo

I added toglobus function to bashrc as well but I didn't get the use of it. If you encounter any errors, let me know again please.

karatugo avatar Jun 21 '24 15:06 karatugo

Updated all pages in the description, please review @Santhi1901 @earlEBI @eks-ebi

karatugo avatar Jun 21 '24 15:06 karatugo

created a service now ticket for curators salloc access. https://embl.service-now.com/esc?id=ticket&table=incident&sys_id=b28db9d91b838610973a646fe54bcbd8

karatugo avatar Jun 26 '24 14:06 karatugo

Looks ok to me.

earlEBI avatar Jun 26 '24 14:06 earlEBI

Curators should have salloc access now.

karatugo avatar Jul 04 '24 10:07 karatugo

The updated commands worked fine for Santhi.

karatugo avatar Jul 04 '24 10:07 karatugo