efo icon indicating copy to clipboard operation
efo copied to clipboard

Protein ratio term request PMID38412862

Open eks-ebi opened this issue 7 months ago • 0 comments

Preferred term label

See spreadsheet (requestedTrait column): https://docs.google.com/spreadsheets/d/1l2YNI4Ruo-KugvoTOPE-djvoJuxVVee1-Ipxqwa5qhY/edit?usp=sharing

These terms should be created using the ratio pattern. In each case:

  • numerator of the ratio = level of numeratorProtein in blood
  • denominator = level of denominatorProtein in blood

Synonyms

In a handful of cases, the protein names extracted from the paper (numeratorProtein or denominatorProtein columns) are not equal to the official HNGC symbol (numeratorProtein_HGNC_symbol or denominatorProtein_HGNC_symbol columns) - the HGNC symbols could be added as synonyms but I don't think it's essential. Full protein names (e.g. numeratorProtein_HGNC_name column) could also be added as synonyms, but I think with the ratio pattern this might be unwieldy.

Textual definition

The ratio of the amount of numeratorProtein to denominatorProtein in the blood.

Suggested parent term

Maybe there could be a general parent term blood protein amount ratio, or similar?

eks-ebi avatar Jul 30 '24 16:07 eks-ebi