E3SM-Project
Adds MAM4xx microphysics interface
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging ERROR: USER HAS COMMITTED TO PR AFTER INSPECTION, INSPECTION IS INVALID! - This PR must be re-inspected by setting label 'AT: PRE-TEST INSPECTED'.
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.
Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:
Pull Request Auto Testing STARTING (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6078
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5849
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Using Repos:
- Repo: SCREAM (eagles-project/scream)
- Branch: oscar-balwinder-mingxuan/mam-microphysics
- SHA: 88e82a83c2cc7549e46b12ba4f5d323b2a15909f
- Mode: TEST_REPO
Pull Request Author: odiazib
Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED
Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.
Pull Request Auto Testing has FAILED (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6078
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5849
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
SCREAM_PullRequest_Autotester_Weaver # 6078 FAILED (click to see last 100 lines of console output)
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 49%] Linking CXX static library libcld_fraction.a
[ 49%] Built target cld_fraction
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 49%] Linking CXX static library libspa.a
[ 49%] Built target spa
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 49%] Linking CXX static library libdiagnostics.a
[ 49%] Linking CXX static library libshoc_sk.a
[ 49%] Built target diagnostics
[ 49%] Built target shoc_sk
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 49%] Linking CXX static library libscream_io.a
[ 49%] Built target scream_io
[ 49%] Building CXX object src/share/CMakeFiles/scream_test_support.dir/util/scream_test_session.cpp.o
[ 49%] Building CXX object src/share/CMakeFiles/scream_test_support.dir/grid/mesh_free_grids_manager.cpp.o
[ 50%] Building CXX object src/control/CMakeFiles/scream_control.dir/atmosphere_driver.cpp.o
[ 50%] Building CXX object src/control/CMakeFiles/scream_control.dir/atmosphere_surface_coupling_importer.cpp.o
[ 50%] Building CXX object src/control/CMakeFiles/scream_control.dir/surface_coupling_utils.cpp.o
[ 50%] Building CXX object src/control/CMakeFiles/scream_control.dir/atmosphere_surface_coupling_exporter.cpp.o
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 51%] Linking CXX static library libnudging.a
[ 51%] Built target nudging
[ 51%] Linking CXX static library libp3_sk.a
gmake[1]: *** [CMakeFiles/Makefile2:4820: src/physics/mam/CMakeFiles/mam.dir/all] Error 2
gmake[1]: *** Waiting for unfinished jobs....
[ 51%] Built target p3_sk
[ 51%] Linking CXX static library libshoc.a
[ 51%] Built target shoc
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 51%] Linking CXX static library libp3.a
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 51%] Built target p3
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 51%] Linking CXX static library libscream_test_support.a
[ 51%] Built target scream_test_support
[ 51%] Linking CXX static library libscream_control.a
[ 51%] Built target scream_control
gmake: *** [Makefile:166: all] Error 2
Build type release failed at testing time. Here's a list of failed tests:
117:mam4_aero_microphys_standalone_baseline_cmp
150:homme_shoc_cld_spa_p3_rrtmgp_128levels_baseline_cmp
Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6078/scream/components/eamxx
weaver failed
######################################################
Build step 'Execute shell' marked build as failure
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins12726980739378571267.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: [email protected]
Finished: FAILURE
SCREAM_PullRequest_Autotester_Mappy # 5849 FAILED (click to see last 100 lines of console output)
For compatibility with older versions of CMake, option is clearing the
normal variable 'HAERO_ENABLE_MPI'.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/externals/haero/CMakeLists.txt:12 (option):
Policy CMP0077 is not set: option() honors normal variables. Run "cmake
--help-policy CMP0077" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
For compatibility with older versions of CMake, option is clearing the
normal variable 'HAERO_ENABLE_TESTS'.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Configuring with build type: Release
-- Building for CPU
-- Building Haero within another project.
-- Generating project files in build directory: /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx/ctest-build/release/externals/haero
-- C++ compiler is /projects/sems/install/rhel9-x86_64/sems/tpl/openmpi/4.1.6/gcc/11.4.0/base/neptmit/bin/mpicxx (GNU 11.4.0)
-- C compiler is /projects/sems/install/rhel9-x86_64/sems/tpl/openmpi/4.1.6/gcc/11.4.0/base/neptmit/bin/mpicc (GNU 11.4.0)
-- Configuring haero v0.1.0
-- Using double precision floating point numbers
-- Configuring on Linux.
-- Installation prefix is /usr/local
-- MPI is enabled
-- Configuring with build type: Release
-- Generating project files in build directory: /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx/ctest-build/release/externals/mam4xx
-- C++ compiler is /projects/sems/install/rhel9-x86_64/sems/tpl/openmpi/4.1.6/gcc/11.4.0/base/neptmit/bin/mpicxx (GNU 11.4.0)
-- C compiler is /projects/sems/install/rhel9-x86_64/sems/tpl/openmpi/4.1.6/gcc/11.4.0/base/neptmit/bin/mpicc (GNU 11.4.0)
-- Configuring MAM4xx v0.1.0
-- Using double precision floating point numbers
-- Installation prefix is /usr/local
CMake Error at cmake/ScreamUtils.cmake:212 (message):
Could not download
scream/mam4xx/linoz/Linoz_Chlorine_Loading_CMIP6_0003-2017_c20171114.nc,
output was: WARNING:root:wget failed with output: and errput File
/sems-data-store/ACME/inputdata/atm/scream/mam4xx/linoz/Linoz_Chlorine_Loading_CMIP6_0003-2017_c20171114.nc
already there; not retrieving.
Checking for file
atm/scream/mam4xx/linoz/Linoz_Chlorine_Loading_CMIP6_0003-2017_c20171114.nc
within /sems-data-store/ACME/inputdata
Input file /sems-data-store/ACME/inputdata/atm/scream/mam4xx/linoz/Linoz_Chlorine_Loading_CMIP6_0003-2017_c20171114.nc needs to be downloaded.
Attempting to download atm/scream/mam4xx/linoz/Linoz_Chlorine_Loading_CMIP6_0003-2017_c20171114.nc from https://web.lcrc.anl.gov/public/e3sm/inputdata/ with protocol wget
FAILED
Traceback (most recent call last):
File "/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx/src/../scripts/check-input", line 45, in <module>
_main_func(__doc__)
File "/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx/src/../scripts/check-input", line 39, in _main_func
success = check_input(**vars(parse_command_line(sys.argv, description)))
File "/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx/scripts/check_input.py", line 55, in check_input
success = download_file(input_root, the_file)
File "/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx/scripts/check_input.py", line 23, in download_file
from CIME.Servers import SVN
ImportError: cannot import name 'SVN' from 'CIME.Servers'
(/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx/scripts/../../../cime/CIME/Servers/init.py)
Call Stack (most recent call first):
tests/single-process/mam/aero_microphys/CMakeLists.txt:44 (GetInputFile)
-- Configuring incomplete, errors occurred!
Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on mappy with cmd: cd /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx && source /projects/sems/modulefiles/utils/sems-modules-init.sh && module purge && module load sems-cmake/3.27.9 sems-git/2.42.0 sems-gcc/11.4.0 sems-openmpi-no-cuda/4.1.6 sems-netcdf-c/4.9.2 sems-netcdf-cxx/4.2 sems-netcdf-fortran/4.6.1 sems-parallel-netcdf/1.12.3 sems-openblas && export GATOR_INITIAL_MB=4000MB && export OMP_PROC_BIND=spread && true && ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m mappy
RUN: cd /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx && source /projects/sems/modulefiles/utils/sems-modules-init.sh && module purge && module load sems-cmake/3.27.9 sems-git/2.42.0 sems-gcc/11.4.0 sems-openmpi-no-cuda/4.1.6 sems-netcdf-c/4.9.2 sems-netcdf-cxx/4.2 sems-netcdf-fortran/4.6.1 sems-parallel-netcdf/1.12.3 sems-openblas && export GATOR_INITIAL_MB=4000MB && export OMP_PROC_BIND=spread && true && ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m mappy
FROM: /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5849/scream/components/eamxx
mappy failed
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 1783998 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs
squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel
[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins2354579999857382900.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: [email protected]
Finished: FAILURE
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:
Pull Request Auto Testing STARTING (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6079
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5850
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Using Repos:
- Repo: SCREAM (eagles-project/scream)
- Branch: oscar-balwinder-mingxuan/mam-microphysics
- SHA: 88e82a83c2cc7549e46b12ba4f5d323b2a15909f
- Mode: TEST_REPO
Pull Request Author: odiazib
Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED
Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.
Pull Request Auto Testing has FAILED (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6079
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5850
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | 88e82a83c2cc7549e46b12ba4f5d323b2a15909f |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
SCREAM_PullRequest_Autotester_Weaver # 6079 FAILED (click to see last 100 lines of console output)
[ 49%] Building Fortran object src/physics/p3/CMakeFiles/p3_sk.dir/p3_iso_c.f90.o
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 49%] Linking CXX static library libcld_fraction.a
[ 49%] Built target cld_fraction
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 49%] Linking CXX static library libspa.a
[ 49%] Built target spa
[ 49%] Linking CXX static library libdiagnostics.a
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 49%] Built target diagnostics
[ 49%] Linking CXX static library libshoc_sk.a
[ 49%] Built target shoc_sk
[ 50%] Linking CXX static library libnudging.a
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 50%] Built target nudging
[ 50%] Linking CXX static library libscream_io.a
[ 50%] Built target scream_io
[ 51%] Building CXX object src/share/CMakeFiles/scream_test_support.dir/grid/mesh_free_grids_manager.cpp.o
[ 51%] Building CXX object src/control/CMakeFiles/scream_control.dir/atmosphere_driver.cpp.o
[ 51%] Building CXX object src/share/CMakeFiles/scream_test_support.dir/util/scream_test_session.cpp.o
[ 51%] Building CXX object src/control/CMakeFiles/scream_control.dir/surface_coupling_utils.cpp.o
[ 51%] Building CXX object src/control/CMakeFiles/scream_control.dir/atmosphere_surface_coupling_importer.cpp.o
[ 51%] Building CXX object src/control/CMakeFiles/scream_control.dir/atmosphere_surface_coupling_exporter.cpp.o
[ 51%] Linking CXX static library libp3_sk.a
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 51%] Built target p3_sk
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
gmake[1]: *** [CMakeFiles/Makefile2:4820: src/physics/mam/CMakeFiles/mam.dir/all] Error 2
gmake[1]: *** Waiting for unfinished jobs....
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 51%] Linking CXX static library libshoc.a
[ 51%] Built target shoc
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/externals/ekat/extern/spdlog/include/spdlog/fmt/bundled/core.h(313): warning #1675-D: unrecognized GCC pragma
[ 51%] Linking CXX static library libp3.a
[ 51%] Built target p3
[ 51%] Linking CXX static library libscream_test_support.a
[ 51%] Built target scream_test_support
[ 51%] Linking CXX static library libscream_control.a
[ 51%] Built target scream_control
gmake: *** [Makefile:166: all] Error 2
Build type release failed at testing time. Here's a list of failed tests:
117:mam4_aero_microphys_standalone_baseline_cmp
Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6079/scream/components/eamxx
weaver failed
######################################################
Build step 'Execute shell' marked build as failure
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins17015824948784208979.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: [email protected]
Finished: FAILURE
SCREAM_PullRequest_Autotester_Mappy # 5850 FAILED (click to see last 100 lines of console output)
[ 53%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_calc_liq_relaxation_timescale.cpp.o
[ 53%] Building CXX object src/physics/p3/CMakeFiles/p3.dir/eti/p3_nr_conservation.cpp.o
[ 53%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_integ_column_stability.cpp.o
[ 53%] Building CXX object src/share/CMakeFiles/scream_test_support.dir/util/scream_test_session.cpp.o
[ 53%] Building CXX object src/physics/p3/CMakeFiles/p3.dir/eti/p3_ni_conservation.cpp.o
[ 53%] Building CXX object src/physics/p3/CMakeFiles/p3.dir/eti/p3_prevent_liq_supersaturation.cpp.o
[ 53%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_ice_relaxation_timescale.cpp.o
[ 53%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_isotropic_ts.cpp.o
[ 53%] Building Fortran object src/physics/p3/CMakeFiles/p3.dir/p3_iso_c.f90.o
[ 53%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_ice_nucleation.cpp.o
[ 53%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_ice_cldliq_wet_growth.cpp.o
[ 54%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_check_values.cpp.o
[ 54%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_incloud_mixingratios.cpp.o
[ 54%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_subgrid_variance_scaling.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_length.cpp.o
[ 54%] Building Fortran object src/physics/shoc/CMakeFiles/shoc_sk.dir/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5850/scream/components/eam/src/physics/cam/shoc.F90.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_linear_interp.cpp.o
[ 54%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_main.cpp.o
[ 54%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_main_part1.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_main.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_check_pblh.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_cldcheck.cpp.o
[ 55%] Building Fortran object src/physics/shoc/CMakeFiles/shoc_sk.dir/shoc_iso_c.f90.o
[ 55%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_main_part2.cpp.o
[ 55%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_main_part3.cpp.o
[ 55%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_ice_supersat_conservation.cpp.o
[ 55%] Linking CXX static library libshoc_sk.a
[ 55%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_nc_conservation.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_height.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_init_pot.cpp.o
[ 55%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_nr_conservation.cpp.o
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_ni_conservation.cpp.o
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/eti/p3_prevent_liq_supersaturation.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_surf_temp.cpp.o
[ 56%] Linking CXX static library libp3.a
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_check_values_impl_disp.cpp.o
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_ice_sed_impl_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_tke.cpp.o
gmake[1]: *** [CMakeFiles/Makefile2:4821: src/physics/mam/CMakeFiles/mam.dir/all] Error 2
gmake[1]: *** Waiting for unfinished jobs....
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_main_impl_part1_disp.cpp.o
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_main_impl_part3_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_tridiag_solver.cpp.o
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_cloud_sed_impl_disp.cpp.o
[ 56%] Built target shoc_sk
[ 56%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_main_impl_disp.cpp.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_update_host_dse.cpp.o
[ 57%] Built target p3
[ 57%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_main_impl_part2_disp.cpp.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_update_prognostics_implicit.cpp.o
[ 58%] Building CXX object src/physics/p3/CMakeFiles/p3_sk.dir/disp/p3_rain_sed_impl_disp.cpp.o
[ 58%] Building Fortran object src/physics/shoc/CMakeFiles/shoc.dir/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5850/scream/components/eam/src/physics/cam/shoc.F90.o
[ 58%] Building Fortran object src/physics/p3/CMakeFiles/p3_sk.dir/p3_iso_c.f90.o
[ 59%] Building Fortran object src/physics/shoc/CMakeFiles/shoc.dir/shoc_iso_c.f90.o
[ 59%] Linking CXX static library libp3_sk.a
[ 59%] Linking CXX static library libshoc.a
[ 59%] Built target p3_sk
[ 59%] Built target shoc
[ 60%] Linking CXX static library libnudging.a
[ 60%] Built target nudging
[ 60%] Linking CXX static library libscream_test_support.a
[ 60%] Built target scream_test_support
[ 60%] Linking CXX static library libscream_control.a
[ 60%] Built target scream_control
gmake: *** [Makefile:166: all] Error 2
Build type release failed at testing time. Here's a list of failed tests:
399:mam4_aero_microphys_standalone_baseline_cmp
Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on mappy with cmd: cd /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5850/scream/components/eamxx && source /projects/sems/modulefiles/utils/sems-modules-init.sh && module purge && module load sems-cmake/3.27.9 sems-git/2.42.0 sems-gcc/11.4.0 sems-openmpi-no-cuda/4.1.6 sems-netcdf-c/4.9.2 sems-netcdf-cxx/4.2 sems-netcdf-fortran/4.6.1 sems-parallel-netcdf/1.12.3 sems-openblas && export GATOR_INITIAL_MB=4000MB && export OMP_PROC_BIND=spread && true && ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m mappy
RUN: cd /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5850/scream/components/eamxx && source /projects/sems/modulefiles/utils/sems-modules-init.sh && module purge && module load sems-cmake/3.27.9 sems-git/2.42.0 sems-gcc/11.4.0 sems-openmpi-no-cuda/4.1.6 sems-netcdf-c/4.9.2 sems-netcdf-cxx/4.2 sems-netcdf-fortran/4.6.1 sems-parallel-netcdf/1.12.3 sems-openblas && export GATOR_INITIAL_MB=4000MB && export OMP_PROC_BIND=spread && true && ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m mappy
FROM: /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5850/scream/components/eamxx
mappy failed
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 1587805 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs
squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel
[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins3774929733803117704.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: [email protected]
Finished: FAILURE
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:
Pull Request Auto Testing STARTING (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6129
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5891
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Using Repos:
- Repo: SCREAM (eagles-project/scream)
- Branch: oscar-balwinder-mingxuan/mam-microphysics
- SHA: ce3637d58ae772c0fd701f6b0332b12f90e6ba08
- Mode: TEST_REPO
Pull Request Author: odiazib
Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED
Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.
Pull Request Auto Testing has FAILED (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6129
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5891
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
SCREAM_PullRequest_Autotester_Weaver # 6129 FAILED (click to see last 100 lines of console output)
> /home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive components/mpas-ocean/src/FFTW # timeout=10
using GIT_SSH to set credentials jgfouca github key
Verifying host key using manually-configured host key entries
Setting http proxy: proxy.sandia.gov:80
> /home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive components/mpas-ocean/src/ppr # timeout=10
using GIT_SSH to set credentials jgfouca github key
Verifying host key using manually-configured host key entries
> /home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive components/ww3/src/WW3 # timeout=10
using GIT_SSH to set credentials jgfouca github key
Verifying host key using manually-configured host key entries
> /home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive components/eam/src/physics/crm/pam/external # timeout=10
using GIT_SSH to set credentials jgfouca github key
Verifying host key using manually-configured host key entries
> /home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive components/mpas-seaice/src/icepack # timeout=10
using GIT_SSH to set credentials jgfouca github key
Verifying host key using manually-configured host key entries
> /home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive externals/haero # timeout=10
using GIT_SSH to set credentials jgfouca github key
Verifying host key using manually-configured host key entries
> /home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive externals/mam4xx # timeout=10
hudson.plugins.git.GitException: Command "/home/projects/ppc64le/git/2.10.1/bin/git submodule update --init --recursive externals/mam4xx" returned status code 1:
stdout:
stderr: Cloning into '/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6129/scream/externals/mam4xx'...
Warning: Permanently added the ECDSA host key for IP address '140.82.114.4' to the list of known hosts.
fatal: git fetch_pack: expected ACK/NAK, got 'ERR upload-pack: not our ref 4b429ed3dde2c3c56bed64674d908b9cd323f2a7'
Fetched in submodule path 'externals/mam4xx', but it did not contain 4b429ed3dde2c3c56bed64674d908b9cd323f2a7. Direct fetching of that commit failed.
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandIn(CliGitAPIImpl.java:2846)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandWithCredentials(CliGitAPIImpl.java:2185)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.lambda$execute$0(CliGitAPIImpl.java:1573)
at Jenkins v2.462.1//com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:131)
at Jenkins v2.462.1//com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:76)
at Jenkins v2.462.1//com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:82)
at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at Jenkins v2.462.1//com.google.common.util.concurrent.DirectExecutorService.execute(DirectExecutorService.java:51)
at java.base/java.util.concurrent.ExecutorCompletionService.submit(ExecutorCompletionService.java:184)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.submitRemainingCommand(GitCommandsExecutor.java:77)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:70)
Also: hudson.remoting.Channel$CallSiteStackTrace: Remote call to weaver
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1826)
at hudson.remoting.UserRequest$ExceptionResponse.retrieve(UserRequest.java:356)
at hudson.remoting.Channel.call(Channel.java:1042)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.execute(RemoteGitImpl.java:153)
at jdk.internal.reflect.GeneratedMethodAccessor105.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.invoke(RemoteGitImpl.java:138)
at PluginClassLoader for git-client/jdk.proxy30/jdk.proxy30.$Proxy100.execute(Unknown Source)
at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:196)
at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1388)
at hudson.scm.SCM.checkout(SCM.java:540)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1247)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:649)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:85)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:521)
at hudson.model.Run.execute(Run.java:1894)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:44)
at hudson.model.ResourceController.execute(ResourceController.java:101)
at hudson.model.Executor.run(Executor.java:446)
Caused: hudson.plugins.git.GitException
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.checkResult(GitCommandsExecutor.java:89)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:69)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:47)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.execute(CliGitAPIImpl.java:1576)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:170)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:161)
at hudson.remoting.UserRequest.perform(UserRequest.java:211)
at hudson.remoting.UserRequest.perform(UserRequest.java:54)
at hudson.remoting.Request$2.run(Request.java:377)
at hudson.remoting.InterceptingExecutorService.lambda$wrap$0(InterceptingExecutorService.java:78)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
at java.base/java.lang.Thread.run(Thread.java:829)
Caused: java.io.IOException: Could not perform submodule update
at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:201)
at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1388)
at hudson.scm.SCM.checkout(SCM.java:540)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1247)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:649)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:85)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:521)
at hudson.model.Run.execute(Run.java:1894)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:44)
at hudson.model.ResourceController.execute(ResourceController.java:101)
at hudson.model.Executor.run(Executor.java:446)
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins5916441682947951344.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: [email protected]
Finished: FAILURE
SCREAM_PullRequest_Autotester_Mappy # 5891 FAILED (click to see last 100 lines of console output)
Verifying host key using manually-configured host key entries
> git submodule update --init --recursive components/mpas-seaice/src/icepack # timeout=10
using GIT_SSH to set credentials jgfouca github key
[INFO] SELinux is present on the host and we could not confirm that it does not apply actively: will try to relabel temporary files now; this may complain if context labeling not applicable after all
> /usr/bin/chcon --type=ssh_home_t /ascldap/users/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5891/scream@tmp/jenkins-gitclient-ssh16165893129930910361.key
Verifying host key using manually-configured host key entries
> git submodule update --init --recursive externals/haero # timeout=10
using GIT_SSH to set credentials jgfouca github key
[INFO] SELinux is present on the host and we could not confirm that it does not apply actively: will try to relabel temporary files now; this may complain if context labeling not applicable after all
> /usr/bin/chcon --type=ssh_home_t /ascldap/users/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5891/scream@tmp/jenkins-gitclient-ssh7498573553243803547.key
Verifying host key using manually-configured host key entries
> git submodule update --init --recursive externals/mam4xx # timeout=10
hudson.plugins.git.GitException: Command "git submodule update --init --recursive externals/mam4xx" returned status code 128:
stdout:
stderr: Cloning into '/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5891/scream/externals/mam4xx'...
fatal: remote error: upload-pack: not our ref 4b429ed3dde2c3c56bed64674d908b9cd323f2a7
fatal: Fetched in submodule path 'externals/mam4xx', but it did not contain 4b429ed3dde2c3c56bed64674d908b9cd323f2a7. Direct fetching of that commit failed.
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandIn(CliGitAPIImpl.java:2846)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandWithCredentials(CliGitAPIImpl.java:2185)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.lambda$execute$0(CliGitAPIImpl.java:1573)
at Jenkins v2.462.1//com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:131)
at Jenkins v2.462.1//com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:76)
at Jenkins v2.462.1//com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:82)
at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:572)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:317)
at Jenkins v2.462.1//com.google.common.util.concurrent.DirectExecutorService.execute(DirectExecutorService.java:51)
at java.base/java.util.concurrent.ExecutorCompletionService.submit(ExecutorCompletionService.java:186)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.submitRemainingCommand(GitCommandsExecutor.java:77)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:70)
Also: hudson.remoting.Channel$CallSiteStackTrace: Remote call to mappy
at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1826)
at hudson.remoting.UserRequest$ExceptionResponse.retrieve(UserRequest.java:356)
at hudson.remoting.Channel.call(Channel.java:1042)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.execute(RemoteGitImpl.java:153)
at jdk.internal.reflect.GeneratedMethodAccessor105.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.invoke(RemoteGitImpl.java:138)
at PluginClassLoader for git-client/jdk.proxy30/jdk.proxy30.$Proxy100.execute(Unknown Source)
at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:196)
at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1388)
at hudson.scm.SCM.checkout(SCM.java:540)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1247)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:649)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:85)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:521)
at hudson.model.Run.execute(Run.java:1894)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:44)
at hudson.model.ResourceController.execute(ResourceController.java:101)
at hudson.model.Executor.run(Executor.java:446)
Caused: hudson.plugins.git.GitException
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.checkResult(GitCommandsExecutor.java:89)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:69)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:47)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.execute(CliGitAPIImpl.java:1576)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:170)
at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:161)
at hudson.remoting.UserRequest.perform(UserRequest.java:211)
at hudson.remoting.UserRequest.perform(UserRequest.java:54)
at hudson.remoting.Request$2.run(Request.java:377)
at hudson.remoting.InterceptingExecutorService.lambda$wrap$0(InterceptingExecutorService.java:78)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:317)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642)
at java.base/java.lang.Thread.run(Thread.java:1583)
Caused: java.io.IOException: Could not perform submodule update
at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:201)
at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1388)
at hudson.scm.SCM.checkout(SCM.java:540)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1247)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:649)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:85)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:521)
at hudson.model.Run.execute(Run.java:1894)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:44)
at hudson.model.ResourceController.execute(ResourceController.java:101)
at hudson.model.Executor.run(Executor.java:446)
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 206204 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs
squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel
[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins17996863543611741201.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: [email protected]
Finished: FAILURE
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:
Pull Request Auto Testing STARTING (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6130
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5892
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Using Repos:
- Repo: SCREAM (eagles-project/scream)
- Branch: oscar-balwinder-mingxuan/mam-microphysics
- SHA: ce3637d58ae772c0fd701f6b0332b12f90e6ba08
- Mode: TEST_REPO
Pull Request Author: odiazib
Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED
Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.
Pull Request Auto Testing has FAILED (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6130
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5892
- Status: FAILED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | ce3637d58ae772c0fd701f6b0332b12f90e6ba08 |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | 8aa209f452903ec3e339747334e2b39bc53c64ad |
| TEST_REPO_ALIAS | SCREAM |
SCREAM_PullRequest_Autotester_Weaver # 6130 FAILED (click to see last 100 lines of console output)
[ 62%] Linking CXX static library libtms.a
[ 62%] Built target tms
nvcc_internal_extended_lambda_implementation: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::p3::Functions >::p3_main_part2_disp(const Int&, const Int&, const Scalar&, const bool&, const bool&, const Scalar&, const Scalar&, const view_dnu_table&, const view_ice_table&, const view_collect_table&, const view_2d_table&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_2d<:pack> >&, scream::p3::Functions >::uview_1d&, scream::p3::Functions >::uview_1d&, const scream::physics::P3_Constants&)::; Tag = __nv_dl_tag, Kokkos::MemoryTraits >&, const Kokkos::View, Kokkos::MemoryTraits >&, const Kokkos::View, Kokkos::MemoryTraits >&, const Kokkos::View, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&, const Kokkos::View<:pack kokkos::cudaspace>**, Kokkos::LayoutRight, Kokkos::Device<:cuda>
Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging ERROR: USER HAS COMMITTED TO PR AFTER INSPECTION, INSPECTION IS INVALID! - This PR must be re-inspected by setting label 'AT: PRE-TEST INSPECTED'.
Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.
Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.
Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.
Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.
Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.
Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:
Pull Request Auto Testing STARTING (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6154
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | dac5eb8501c211b4211327cf141b4c3a3e6c51cc |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | c41c698df5bee5324c7b8b6d6b31a38525d43ec6 |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5911
- Status: STARTED
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | dac5eb8501c211b4211327cf141b4c3a3e6c51cc |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | c41c698df5bee5324c7b8b6d6b31a38525d43ec6 |
| TEST_REPO_ALIAS | SCREAM |
Using Repos:
- Repo: SCREAM (eagles-project/scream)
- Branch: oscar-balwinder-mingxuan/mam-microphysics
- SHA: dac5eb8501c211b4211327cf141b4c3a3e6c51cc
- Mode: TEST_REPO
Pull Request Author: odiazib
Status Flag 'Pull Request AutoTester' - Error: Jenkins Jobs - A user has pushed a change to the PR before testing completed. NEW EVENT 'committed', ID C_kwDOCEfuetoAKDZmYjRiMzJmZjZkNjkxMjQ0OGM5NzgzNjA2NGUwYjQ0YmI4MTM1Y2Y... The Jenkins Jobs will be shutdown; Testing of this PR must occur again.
Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED
Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.
Pull Request Auto Testing has FAILED (click to expand)
Build Information
Test Name: SCREAM_PullRequest_Autotester_Weaver
- Build Num: 6154
- Status: ERROR
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | dac5eb8501c211b4211327cf141b4c3a3e6c51cc |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | c41c698df5bee5324c7b8b6d6b31a38525d43ec6 |
| TEST_REPO_ALIAS | SCREAM |
Build Information
Test Name: SCREAM_PullRequest_Autotester_Mappy
- Build Num: 5911
- Status: ERROR
Jenkins Parameters
| Parameter Name | Value |
|---|---|
| PR_LABELS | AT: RETEST;EAGLES;MAM |
| PULLREQUESTNUM | 3013 |
| SCREAM_SOURCE_REPO | https://github.com/eagles-project/scream |
| SCREAM_SOURCE_SHA | dac5eb8501c211b4211327cf141b4c3a3e6c51cc |
| SCREAM_TARGET_BRANCH | master |
| SCREAM_TARGET_REPO | https://github.com/E3SM-Project/scream |
| SCREAM_TARGET_SHA | c41c698df5bee5324c7b8b6d6b31a38525d43ec6 |
| TEST_REPO_ALIAS | SCREAM |
SCREAM_PullRequest_Autotester_Weaver # 6154 ERROR (click to see last 100 lines of console output)
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Cuda/Kokkos_Cuda_Parallel_Team.hpp: In constructor 'Kokkos::Impl::ParallelFor, Kokkos::Cuda>::ParallelFor(const FunctorType&, const Policy&) [with FunctorType = scream::MAMWetscav::Preprocess; Properties = {Kokkos::Cuda}]':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Cuda/Kokkos_Cuda_Parallel_Team.hpp:533:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
533 | ParallelFor(const FunctorType& arg_functor, const Policy& arg_policy)
| ^ ~~~~~~~~~
nvcc_internal_extended_lambda_implementation: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::Nudging::run_impl(double)::; Tag = __nv_dl_tag; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = bool; F2 = ekat::LinInterp; F3 = Kokkos::View<:pack>**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >; F4 = Kokkos::View**, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >; F5 = Kokkos::View<:pack>*, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >]':
nvcc_internal_extended_lambda_implementation:591:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/share/io/scorpio_output.cpp: In member function 'std::vector scream::AtmosphereOutput::get_var_dof_offsets(const scream::FieldLayout&)':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/share/io/scorpio_output.cpp:1131:20: warning: 'min_gid' may be used uninitialized in this function [-Wmaybe-uninitialized]
1131 | auto offset = (gid-min_gid)*col_size;
| ~~~~~^~~~~~~~~~
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/share/io/scorpio_output.cpp:1088:24: note: 'min_gid' was declared here
1088 | AbstractGrid::gid_type min_gid;
| ^~~~~~~
nvcc_internal_extended_lambda_implementation: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::p3::check_values_f(scream::Real*, scream::Real*, ekat::Int, ekat::Int, ekat::Int, bool, ekat::Int, scream::Real*)::; Tag = __nv_dl_tag; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = Kokkos::View<:pack>*, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >; F2 = Kokkos::View<:pack>*, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >; F3 = int; F4 = int; F5 = int; F6 = bool; F7 = int; F8 = Kokkos::View, Kokkos::MemoryTraits >]':
nvcc_internal_extended_lambda_implementation:482:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/physics/p3/eamxx_p3_process_interface.cpp: In member function 'virtual void scream::P3Microphysics::set_grids(std::shared_ptr)':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/physics/p3/eamxx_p3_process_interface.cpp:57:88: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
57 | FieldLayout scalar3d_layout_mid { {COL,LEV}, {m_num_cols,m_num_levs} };
| ^
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/physics/shoc/impl/shoc_main_impl.hpp: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::shoc::Functions >::shoc_init(const Int&, const Int&, scream::shoc::Functions >::view_1d >&)::; Tag = __nv_dl_tag*, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >&), scream::shoc::Functions >::shoc_init, 1>; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = const int; F2 = const int; F3 = const Kokkos::View*, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >; F4 = Kokkos::View, Kokkos::MemoryTraits >]':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/physics/shoc/impl/shoc_main_impl.hpp:31:456: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
31 | Kokkos::parallel_for(policy, KOKKOS_LAMBDA(const MemberType& team) {
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_Parallel.hpp: In function 'void Kokkos::parallel_for(const string&, const ExecPolicy&, const FunctorType&) [with ExecPolicy = Kokkos::RangePolicy; FunctorType = scream::P3Microphysics::p3_preamble; Enable = void]':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_Parallel.hpp:133:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
133 | inline void parallel_for(const std::string& str, const ExecPolicy& policy,
| ^~~~~~~~~~~~
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_Parallel.hpp: In function 'void Kokkos::parallel_for(const string&, const ExecPolicy&, const FunctorType&) [with ExecPolicy = Kokkos::MDRangePolicy<:rank kokkos::iterate::default> >; FunctorType = __nv_hdl_wrapper_t, void(int, int, int), const Kokkos::View, Kokkos::MemoryTraits >, const double, const Kokkos::View, Kokkos::MemoryTraits >, const Kokkos::View, Kokkos::MemoryTraits >, const Kokkos::View, Kokkos::MemoryTraits >, const double, const Kokkos::View, Kokkos::MemoryTraits >, const Kokkos::View, Kokkos::MemoryTraits >, const Kokkos::View, Kokkos::MemoryTraits > >; Enable = void]':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_Parallel.hpp:133:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
133 | inline void parallel_for(const std::string& str, const ExecPolicy& policy,
| ^~~~~~~~~~~~
nvcc_internal_extended_lambda_implementation: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::shoc::update_prognostics_implicit_f(ekat::Int, ekat::Int, ekat::Int, ekat::Int, scream::Real, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*, scream::Real*)::; Tag = __nv_dl_tag; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = int; F2 = int; F3 = const Kokkos::View, Kokkos::MemoryTraits >; F4 = const Kokkos::View, Kokkos::MemoryTraits >]':
nvcc_internal_extended_lambda_implementation:462:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
[ 63%] Linking CXX static library libspa.a
[ 63%] Built target spa
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/physics/mam/eamxx_mam_aci_functions.hpp: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::_GLOBAL__N__d5616902_35_eamxx_mam_aci_process_interface_cpp_59b60e8b::store_liquid_cloud_fraction(haero::ThreadTeamPolicy, const scream::mam_coupling::DryAtmosphere&, scream::MAMAci::const_view_2d, scream::MAMAci::const_view_2d, int, int, scream::MAMAci::view_2d, scream::MAMAci::view_2d)::; Tag = __nv_dl_tag, const scream::mam_coupling::DryAtmosphere&, Kokkos::View, Kokkos::MemoryTraits >, Kokkos::View, Kokkos::MemoryTraits >, int, int, Kokkos::View, Kokkos::MemoryTraits >, Kokkos::View, Kokkos::MemoryTraits >), scream::_GLOBAL__N__d5616902_35_eamxx_mam_aci_process_interface_cpp_59b60e8b::store_liquid_cloud_fraction, 1>; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = const int; F2 = const int; F3 = Kokkos::View, Kokkos::MemoryTraits >; F4 = Kokkos::View, Kokkos::MemoryTraits >; F5 = Kokkos::View, Kokkos::MemoryTraits >; F6 = const Kokkos::View, Kokkos::MemoryTraits >; F7 = Kokkos::View, Kokkos::MemoryTraits >; F8 = const Kokkos::View, Kokkos::MemoryTraits >]':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx/src/physics/mam/eamxx_mam_aci_functions.hpp:179:933: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
179 | Kokkos::parallel_for(
| ^
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_Parallel.hpp: In function 'void Kokkos::parallel_for(const string&, const ExecPolicy&, const FunctorType&) [with ExecPolicy = Kokkos::MDRangePolicy<:cuda kokkos::rank kokkos::iterate::right>, Kokkos::IndexType >; FunctorType = Kokkos::Impl::ViewCopy<:view kokkos::layoutright kokkos::device kokkos::anonymousspace>, Kokkos::MemoryTraits >, Kokkos::View, Kokkos::MemoryTraits >, Kokkos::LayoutRight, Kokkos::Cuda, 2, int>; Enable = void]':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_Parallel.hpp:133:1: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
133 | inline void parallel_for(const std::string& str, const ExecPolicy& policy,
| ^~~~~~~~~~~~
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_View.hpp: In lambda function:
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/Kokkos_View.hpp:840:32: warning: 'ws_idx_broadcast' may be used uninitialized in this function [-Wmaybe-uninitialized]
840 | return m_map.m_impl_handle[i0];
| ^~
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/src/ekat/kokkos/ekat_kokkos_utils.hpp:584:5: note: 'ws_idx_broadcast' was declared here
584 | int ws_idx_broadcast;
| ^ ~~~~~~~~~~~~~~
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/KokkosExp_MDRangePolicy.hpp: In copy constructor 'Kokkos::MDRangePolicy<:cuda kokkos::rank kokkos::iterate::right>, Kokkos::IndexType >::MDRangePolicy(const Kokkos::MDRangePolicy<:cuda kokkos::rank kokkos::iterate::right>, Kokkos::IndexType >&)':
/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/externals/ekat/extern/kokkos/core/src/KokkosExp_MDRangePolicy.hpp:153:8: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
153 | struct MDRangePolicy : public Kokkos::Impl::PolicyTraits {
| ^~~~~~~~~~~~~
nvcc_internal_extended_lambda_implementation: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::p3::check_values_f(scream::Real*, scream::Real*, ekat::Int, ekat::Int, ekat::Int, bool, ekat::Int, scream::Real*)::; Tag = __nv_dl_tag; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = Kokkos::View<:pack>*, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >; F2 = Kokkos::View<:pack>*, Kokkos::LayoutRight, Kokkos::Device<:cuda kokkos::cudaspace>, Kokkos::MemoryTraits >; F3 = int; F4 = int; F5 = int; F6 = bool; F7 = int; F8 = Kokkos::View, Kokkos::MemoryTraits >]':
nvcc_internal_extended_lambda_implementation:482:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
[ 63%] Linking CXX static library libshoc_sk.a
[ 63%] Built target shoc_sk
gmake[1]: *** [CMakeFiles/Makefile2:6051: src/physics/mam/CMakeFiles/mam.dir/all] Error 2
gmake[1]: *** Waiting for unfinished jobs....
nvcc_internal_extended_lambda_implementation: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::p3::Functions >::p3_main_internal(const scream::p3::Functions >::P3Runtime&, const scream::p3::Functions >::P3PrognosticState&, const scream::p3::Functions >::P3DiagnosticInputs&, const scream::p3::Functions >::P3DiagnosticOutputs&, const scream::p3::Functions >::P3Infrastructure&, const scream::p3::Functions >::P3HistoryOnly&, const scream::p3::Functions >::P3LookupTables&, const WorkspaceManager&, ekat::Int, ekat::Int)::; Tag = __nv_dl_tag >::P3Runtime&, const scream::p3::Functions >::P3PrognosticState&, const scream::p3::Functions >::P3DiagnosticInputs&, const scream::p3::Functions >::P3DiagnosticOutputs&, const scream::p3::Functions >::P3Infrastructure&, const scream::p3::Functions >::P3HistoryOnly&, const scream::p3::Functions >::P3LookupTables&, const ekat::WorkspaceManager<:pack>, Kokkos::Device<:cuda kokkos::cudaspace> >&, int, int), scream::p3::Functions >::p3_main_internal, 1>; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = const ekat::WorkspaceManager<:pack>, Kokkos::Device<:cuda kokkos::cudaspace> >; F2 = const scream::p3::Functions >::P3DiagnosticInputs; F3 = const scream::p3::Functions >::P3Infrastructure; F4 = const scream::p3::Functions >::P3PrognosticState; F5 = const scream::p3::Functions >::P3DiagnosticOutputs; F6 = const scream::p3::Functions >::P3HistoryOnly; F7 = const int; F8 = int; F9 = const scream::p3::Functions >::P3Runtime; F10 = const double; F11 = const scream::p3::Functions >::P3LookupTables; F12 = const int; F13 = const int; F14 = const int; F15 = const bool]':
nvcc_internal_extended_lambda_implementation:741:19: note: the layout of aggregates containing vectors with 2-byte alignment has changed in GCC 5
[ 63%] Linking CXX static library libp3_sk.a
[ 63%] Built target p3_sk
[ 63%] Linking CXX static library libscream_io.a
[ 63%] Built target scream_io
[ 63%] Linking CXX static library libdiagnostics.a
[ 63%] Built target diagnostics
[ 63%] Linking CXX static library libnudging.a
[ 63%] Built target nudging
[ 63%] Linking CXX static library libshoc.a
[ 63%] Built target shoc
[ 63%] Linking CXX static library libp3.a
[ 63%] Built target p3
nvcc_internal_extended_lambda_implementation: In static member function 'static void* __nv_hdl_wrapper_t::manager::do_copy(void*) [with Lambda = scream::RRTMGPRadiation::run_impl(double)::; Tag = __nv_dl_tag; OpFuncR = void; OpFuncArgs = {const Kokkos::Impl::CudaTeamMember&}; F1 = const int; F2 = const int; F3 = yakl::Array; F4 = Kokkos::View, Kokkos::MemoryTraits >]':
nvcc_internal_extended_lambda_implementation:690:19: note: the layout of aggregates containing vectors with 8-byte alignment has changed in GCC 5
[ 64%] Linking CXX static library libscream_rrtmgp.a
[ 64%] Built target scream_rrtmgp
gmake: *** [Makefile:166: all] Error 2
Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/6154/scream/components/eamxx
weaver failed
######################################################
Build step 'Execute shell' marked build as failure
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins9103470758363347705.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: [email protected]
Finished: FAILURE
SCREAM_PullRequest_Autotester_Mappy # 5911 ERROR (click to see last 100 lines of console output)
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_length.cpp.o
[ 52%] Linking CXX static library libp3.a
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_diag_second_shoc_moments.cpp.o
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_diag_third_shoc_moments.cpp.o
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_dp_inverse.cpp.o
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_eddy_diffusivities.cpp.o
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_energy_fixer.cpp.o
[ 52%] Built target p3_sk
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_energy_integrals.cpp.o
[ 52%] Built target p3
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_grid.cpp.o
[ 52%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_integ_column_stability.cpp.o
[ 53%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_isotropic_ts.cpp.o
[ 53%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_length.cpp.o
[ 53%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_linear_interp.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_main.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_linear_interp.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_main.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_check_pblh.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_pblintd.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_pblintd_check_pblh.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_pblintd_cldcheck.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_pblintd_height.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_cldcheck.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_pblintd_init_pot.cpp.o
[ 54%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_height.cpp.o
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[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_pblintd_surf_temp.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_tke.cpp.o
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[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_update_host_dse.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/eti/shoc_update_prognostics_implicit.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_energy_integrals_disp.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_energy_fixer_disp.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_check_tke_disp.cpp.o
[ 55%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_grid_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_compute_shoc_vapor_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_pblintd_surf_temp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_compute_shoc_temperature_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_diag_obklen_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_pblintd_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_length_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_tke.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_tke_disp.cpp.o
[ 56%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_tridiag_solver.cpp.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_update_host_dse.cpp.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_update_prognostics_implicit_disp.cpp.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc.dir/eti/shoc_update_prognostics_implicit.cpp.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_diag_third_shoc_moments_disp.cpp.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_diag_second_shoc_moments_disp.cpp.o
[ 57%] Building Fortran object src/physics/shoc/CMakeFiles/shoc.dir/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5911/scream/components/eam/src/physics/cam/shoc.F90.o
[ 57%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_assumed_pdf_disp.cpp.o
[ 58%] Building CXX object src/physics/shoc/CMakeFiles/shoc_sk.dir/disp/shoc_update_host_dse_disp.cpp.o
[ 58%] Building Fortran object src/physics/shoc/CMakeFiles/shoc_sk.dir/home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5911/scream/components/eam/src/physics/cam/shoc.F90.o
[ 59%] Building Fortran object src/physics/shoc/CMakeFiles/shoc.dir/shoc_iso_c.f90.o
[ 59%] Building Fortran object src/physics/shoc/CMakeFiles/shoc_sk.dir/shoc_iso_c.f90.o
gmake[1]: *** [CMakeFiles/Makefile2:4821: src/physics/mam/CMakeFiles/mam.dir/all] Error 2
gmake[1]: *** Waiting for unfinished jobs....
[ 60%] Linking CXX static library libnudging.a
[ 60%] Built target nudging
[ 60%] Linking CXX static library libshoc_sk.a
[ 60%] Linking CXX static library libshoc.a
[ 60%] Built target shoc_sk
[ 60%] Built target shoc
[ 60%] Linking CXX static library libscream_test_support.a
[ 60%] Built target scream_test_support
[ 60%] Linking CXX static library libscream_control.a
[ 60%] Built target scream_control
gmake: *** [Makefile:166: all] Error 2
CMake Error at /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5911/scream/components/eamxx/cmake/ctest_script.cmake:76 (message):
Test had fails
CMake Error at /home/e3sm-jenkins/jenkins-ws/workspace/SCREAM_PullRequest_Autotester_Mappy/5911/scream/components/eamxx/cmake/ctest_script.cmake:76 (message):
Test had fails
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 3138946 killed;
[ssh-agent] Stopped.
Build was aborted
Aborted by Luca Bertagna
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs
squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel
[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins4772832249533917331.sh
Terminated
Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.
