RenalTumor

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absence of R code of FunctionsclusterProfiler.GSEA.R

1

Dear Lin, We notice that there are no codes related to the FunctionsclusterProfiler.GSEA.R in the step of cell identity annotation. Could you please upload the file? Best

zhangcy888

I try to apply your code to analyze my data, but i can not find the funciton "Harmony.integration.reduceDimension", can you upload it ? Thanks

yang-pumc

Error in motif enrichment script

1

Hello there! I am using your code to recreate some plots for my data. However, I got an error when I tried to create the ggseqlogo plots with chromvar assay....

emanuelavilla

Hi - is it possible to share the processed scRNAseq with cell type annotations? I couldn't find it in the manuscript or this github repo. Thank you!

xiaosaiyao

Hello, your work is fantastic, and I'm trying to reproduce this article for my own data. However, I've encountered a couple of issues. Currently, I've found that these two script...

BUCT-jiaozi