DooYal

kaiju-mkbwt step is always killed

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output log file: [root@localhost kaiju]# kaiju-mkbwt -n 16 -a ACDEFGHIKLMNPQRSTVWY -o refseq/refseq refseq/kaiju_db_refseq.faa # infilename= refseq/kaiju_db_refseq.faa # outfilename= refseq/refseq # Alphabet= ACDEFGHIKLMNPQRSTVWY # nThreads= 16 # length= 0.000000 # checkpoint=...

[root@localhost bamcov]# make cd htslib && make libhts.a make[1]: Entering directory '/root/bamcov/htslib' gcc -g -Wall -O2 -I. -c -o bgzf.o bgzf.c In file included from bgzf.c:43: htslib/bgzf.h:35:10: fatal error: zlib.h:...

When I process metaplots, the log printed that: ========================================================================== No obviously periodicity are detected from bam file SRR22462570/SRR22462570.Aligned.toTranscriptome.out.bam, it could be due to poor quality sequencing. Please check the metagene...

So how to limitize the CPU requirement in the codes?

I just provide the sequence fasta file, so how to skip "[Pdb]" input

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