HistomicsStream icon indicating copy to clipboard operation
HistomicsStream copied to clipboard

ENH: Create a convenience function for generating studies

Open cooperlab opened this issue 2 years ago • 1 comments

Write a simple function that applies a single set of parameters (tile size, overlap, chunk size) to a nested list of slides to generate a study for each list of slides.

Consider consolidating calls to 'hs.configure.FindResolutionForSlide' and 'hs.configure.TilesByGridAndMask' within this function, and possibly so that users have a single function call to generate a complete study.

cooperlab avatar Jul 04 '22 19:07 cooperlab

histomcis_stream currently asks the user to create a set of nested dictionaries to specify study-wide and slide-wide parameters, and then works from there. Is this issues asking that instead of creating a dictionary, the user be able to specify these parameters as arguments to functions?

Leengit avatar Feb 03 '23 15:02 Leengit