NotificationService crashes with PSQLException: column list index is out of range: 1, number of columns: 0.

[oddcb]

Current Behavior:

After restarting the api-server it starts updating itself with Github Advisories, OSV etc. After completing the update it crashes:

(...)
2022-10-18 08:09:53,145 INFO [GitHubAdvisoryMirrorTask] Updating datasource with GitHub advisories
2022-10-18 08:09:56,198 INFO [GitHubAdvisoryMirrorTask] GitHub Advisory mirroring complete
2022-10-18 08:09:56,198 INFO [GitHubAdvisoryMirrorTask] Time spent (total): 482040ms
2022-10-18 08:09:56,208 ERROR [LoggableUncaughtExceptionHandler] An unknown error occurred in an asynchronous event or notification thread
javax.jdo.JDODataStoreException: Cannot set String parameter: value = SYSTEM for column "" : The column index is out of range: 1, number of columns: 0.
        at org.datanucleus.api.jdo.JDOAdapter.getJDOExceptionForNucleusException(JDOAdapter.java:605)
        at org.datanucleus.api.jdo.JDOQuery.executeInternal(JDOQuery.java:456)
        at org.datanucleus.api.jdo.JDOQuery.execute(JDOQuery.java:276)
        at org.dependencytrack.notification.NotificationRouter.resolveRules(NotificationRouter.java:147)
        at org.dependencytrack.notification.NotificationRouter.inform(NotificationRouter.java:56)
        at alpine.notification.NotificationService.lambda$alertSubscriber$0(NotificationService.java:110)
        at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
        at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
        at java.base/java.lang.Thread.run(Unknown Source)
Caused by: org.postgresql.util.PSQLException: The column index is out of range: 1, number of columns: 0.
        at org.postgresql.core.v3.SimpleParameterList.bind(SimpleParameterList.java:70)
        at org.postgresql.core.v3.SimpleParameterList.setStringParameter(SimpleParameterList.java:133)
        at org.postgresql.jdbc.PgPreparedStatement.bindString(PgPreparedStatement.java:1099)
        at org.postgresql.jdbc.PgPreparedStatement.setString(PgPreparedStatement.java:387)
        at org.postgresql.jdbc.PgPreparedStatement.setString(PgPreparedStatement.java:373)
        at com.zaxxer.hikari.pool.HikariProxyPreparedStatement.setString(HikariProxyPreparedStatement.java)
        at org.datanucleus.store.rdbms.mapping.column.CharColumnMapping.setString(CharColumnMapping.java:261)
        at org.datanucleus.store.rdbms.mapping.java.EnumMapping.setObject(EnumMapping.java:170)
        at org.datanucleus.store.rdbms.sql.SQLStatementHelper.applyParametersToStatement(SQLStatementHelper.java:311)
        at org.datanucleus.store.rdbms.query.BulkFetchHandler.applyParametersToStatement(BulkFetchHandler.java:99)
        at org.datanucleus.store.rdbms.query.JDOQLQuery.performExecute(JDOQLQuery.java:715)
        at org.datanucleus.store.query.Query.executeQuery(Query.java:2004)
        at org.datanucleus.store.query.Query.executeWithArray(Query.java:1893)
        at org.datanucleus.api.jdo.JDOQuery.executeInternal(JDOQuery.java:433)
        ... 7 common frames omitted

I have no notifications defined through the UI:

This instance was updated from 4.5.0 to 4.6.0 and then 4.6.1.

PG-version is 14.3-1.pgdg110+1 from postgres:14.3-bullseye@sha256:c976fe9355f53fd93c087e0875be401ad19fa5c3c894b5ae44c03ae9c573cbba

Environment:

• Dependency-Track Version: 4.6.1
• Distribution: Docker
• BOM Format & Version:
• Database Server: PostgreSQL

Additional Details:

(e.g. detailed explanation, stacktraces, related issues, suggestions how to fix, links for us to have context, eg. stackoverflow, gitter, etc)

[nscuro]

I just saw this too during local testing, however I am unable to reproduce it again. I tried multiple times, but it does not reoccur.

I suspect this is a bug in the query compilation of the ORM we use, but I'd need a reproducible setup in order to verify.

Put this as p3 for now, as the exception does not have an impact, other than the notification not being sent. If you did not configure an alert for SYSTEM -> DATASOURCE_MIRRORING, the defect will not affect you at all.

[nscuro]

Found the issue and proposed a fix to the ORM project (https://github.com/datanucleus/datanucleus-rdbms/issues/491). This is blocked until the fix is accepted and a new version is released.

[nscuro]

Fix was accepted, now waiting for a new DataNucleus release.

[nscuro]

Fix was released with DataNucleus 6.0.8.

[github-actions[bot]]

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