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some i-rmsd values in haddock stats files are not correct

Open LilySnow opened this issue 5 years ago • 1 comments

This issue is not related with deeprank code directly. It is to record a data error introduced when we use haddock to generate data.

Some i-RMSDs reported in XXX.stats do not seem to be correct. For example, 1ACB_cm-it0_9323.pdb has an irmsd of 8.888 in 1ACB.stats, but deeprank calculated 17.632. I used ProFit and got the same number as deeprank. I got the refe pdb and the model pdb from 1ACB.tgz, and i-zone files from HADDOCK-ready/1ACB/ana_scripts/target.izone I put all these files under /projects/0/deeprank/BM5/irmsd_debug on cartesius.

This error is confirmed by Alex.

LilySnow avatar Apr 29 '19 19:04 LilySnow

Well - this is not a DeekRand code issue. Not doesn't make sense to open an issue for this here. It's more for us to correct those values before we make any decoys public.

amjjbonvin avatar May 03 '19 08:05 amjjbonvin