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Seb/display skeleton

Open hausmanns opened this issue 1 year ago • 5 comments

Skeleton visualisation of keypoints.

https://github.com/DeepLabCut/napari-deeplabcut/assets/28102185/60f1849e-4850-4a2f-9c73-506a1b068e64

For now hardcoded with my keypoints but should be easily adjustable to use config bodyparts. For now, the show skeleton tick box is not connected to skeleton, as the skeleton is displayed when read_hdf is called.

Left Todos:

  • [ ] Adjust skeleton to config skeleton
  • [ ] Make use of the "Show Skeleton" tick box.

hausmanns avatar Aug 25 '23 16:08 hausmanns

Awesome! Let's talk on Monday to finalize it 😊

jeylau avatar Aug 25 '23 16:08 jeylau

I'd even add a more ambitious todo: display the skeleton edges dynamically, as a user is annotating keypoints.

jeylau avatar Aug 25 '23 16:08 jeylau

Preview page for your plugin is ready here: https://preview.napari-hub.org/DeepLabCut/napari-deeplabcut/92 Created: 2023-08-30T12:38:25.604699

I would say lets please finish or kill cc @hausmanns @jeylau

MMathisLab avatar Feb 19 '24 19:02 MMathisLab

I think this was a very useful addition! We'll polish it!

hausmanns avatar Feb 22 '24 11:02 hausmanns