ConfGF
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DeepGraphLearning
Unable to recreate the environment
Hi, I'm using Miniconda3 Linux 64-bit - Python 3.7 version. I tried both the methods given in the repository to set up the environment but the installation failed while downloading pytorch-geometric libraries. The pip installations in yml file fails every time with the following message:
Installing pip dependencies: \ Ran pip subprocess with arguments:
['/home/dhruv/miniconda3/envs/confgf/bin/python', '-m', 'pip', 'install', '-U', '-r', '/home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt', '--exists-action=b']
Pip subprocess output:
Looking in indexes: https://pypi.org/simple, https://dev-pypi.aganitha.ai/
Looking in links: https://pytorch-geometric.com/whl/torch-1.7.0+cpu.html
Collecting ase==3.21.1
Downloading ase-3.21.1-py3-none-any.whl (2.2 MB)
Collecting cached-property==1.5.2
Downloading cached_property-1.5.2-py2.py3-none-any.whl (7.6 kB)
Collecting chardet==4.0.0
Downloading chardet-4.0.0-py2.py3-none-any.whl (178 kB)
Collecting dataclasses==0.6
Downloading dataclasses-0.6-py3-none-any.whl (14 kB)
Collecting future==0.18.2
Downloading future-0.18.2.tar.gz (829 kB)
Collecting googledrivedownloader==0.4
Downloading googledrivedownloader-0.4-py2.py3-none-any.whl (3.9 kB)
Collecting h5py==3.1.0
Downloading h5py-3.1.0-cp37-cp37m-manylinux1_x86_64.whl (4.0 MB)
Collecting idna==2.10
Downloading idna-2.10-py2.py3-none-any.whl (58 kB)
Collecting isodate==0.6.0
Downloading isodate-0.6.0-py2.py3-none-any.whl (45 kB)
Collecting jinja2==3.0.1
Downloading Jinja2-3.0.1-py3-none-any.whl (133 kB)
Collecting llvmlite==0.36.0
Downloading llvmlite-0.36.0-cp37-cp37m-manylinux2010_x86_64.whl (25.3 MB)
Collecting markupsafe==2.0.1
Downloading MarkupSafe-2.0.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (31 kB)
Collecting numba==0.53.1
Downloading numba-0.53.1-cp37-cp37m-manylinux2014_x86_64.whl (3.4 MB)
Collecting python-louvain==0.13
Downloading python-louvain-0.13.tar.gz (18 kB)
Collecting pyyaml==5.3.1
Downloading PyYAML-5.3.1.tar.gz (269 kB)
Collecting rdflib==5.0.0
Downloading rdflib-5.0.0-py3-none-any.whl (231 kB)
Collecting requests==2.25.1
Downloading requests-2.25.1-py2.py3-none-any.whl (61 kB)
Collecting torch-cluster
Downloading torch_cluster-1.6.0.tar.gz (43 kB)
Collecting torch-geometric==1.6.3
Downloading torch_geometric-1.6.3.tar.gz (186 kB)
Collecting torch-scatter
Using cached torch_scatter-2.1.0.tar.gz (106 kB)
Collecting torch-sparse
Downloading torch_sparse-0.6.16.tar.gz (208 kB)
Collecting torch-spline-conv
Downloading https://data.pyg.org/whl/torch-1.7.0%2Bcpu/torch_spline_conv-1.2.1-cp37-cp37m-linux_x86_64.whl (135 kB)
Collecting urllib3==1.26.5
Downloading urllib3-1.26.5-py2.py3-none-any.whl (138 kB)
Requirement already satisfied: matplotlib>=2.0.0 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from ase==3.21.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 2)) (3.3.4)
Requirement already satisfied: numpy>=1.11.3 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from ase==3.21.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 2)) (1.20.2)
Requirement already satisfied: scipy>=0.18.1 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from ase==3.21.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 2)) (1.6.2)
Requirement already satisfied: six in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from isodate==0.6.0->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 10)) (1.15.0)
Requirement already satisfied: setuptools in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from numba==0.53.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 14)) (52.0.0.post20210125)
Requirement already satisfied: networkx in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from python-louvain==0.13->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 15)) (2.5)
Requirement already satisfied: pyparsing in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from rdflib==5.0.0->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 17)) (2.4.7)
Requirement already satisfied: certifi>=2017.4.17 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from requests==2.25.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 18)) (2021.5.30)
Requirement already satisfied: torch in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (1.7.0)
Requirement already satisfied: tqdm in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (4.59.0)
Requirement already satisfied: scikit-learn in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (0.24.2)
Requirement already satisfied: pandas in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (1.2.4)
Requirement already satisfied: pillow>=6.2.0 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from matplotlib>=2.0.0->ase==3.21.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 2)) (8.2.0)
Requirement already satisfied: cycler>=0.10 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from matplotlib>=2.0.0->ase==3.21.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 2)) (0.10.0)
Requirement already satisfied: kiwisolver>=1.0.1 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from matplotlib>=2.0.0->ase==3.21.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 2)) (1.3.1)
Requirement already satisfied: python-dateutil>=2.1 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from matplotlib>=2.0.0->ase==3.21.1->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 2)) (2.8.1)
Requirement already satisfied: decorator>=4.3.0 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from networkx->python-louvain==0.13->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 15)) (5.0.9)
Requirement already satisfied: pytz>=2017.3 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from pandas->torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (2021.1)
Requirement already satisfied: joblib>=0.11 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from scikit-learn->torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (1.0.1)
Requirement already satisfied: threadpoolctl>=2.0.0 in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from scikit-learn->torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (2.1.0)
Requirement already satisfied: typing_extensions in /home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages (from torch->torch-geometric==1.6.3->-r /home/dhruv/work/github/ConfGF/condaenv.ze5v_33c.requirements.txt (line 20)) (3.7.4.3)
Building wheels for collected packages: future, python-louvain, pyyaml, torch-geometric, torch-cluster, torch-scatter, torch-sparse
Building wheel for future (setup.py): started
Building wheel for future (setup.py): finished with status 'done'
Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491059 sha256=b727b0996b69214b156ea5c5f0c4b078531a34d5c575ea43ee2cb7a5de0c2df5
Stored in directory: /home/dhruv/.cache/pip/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0
Building wheel for python-louvain (setup.py): started
Building wheel for python-louvain (setup.py): finished with status 'done'
Created wheel for python-louvain: filename=python_louvain-0.13-py3-none-any.whl size=9222 sha256=f83375b047416d12159160eb6227c42eb1198fbed2c9b250e3f841c383d40864
Stored in directory: /home/dhruv/.cache/pip/wheels/dd/6b/3b/87539deabac63a68ec34be2867308907d0544e11ba4d4e728d
Building wheel for pyyaml (setup.py): started
Building wheel for pyyaml (setup.py): finished with status 'done'
Created wheel for pyyaml: filename=PyYAML-5.3.1-cp37-cp37m-linux_x86_64.whl size=44620 sha256=09eb08962d8ef3f2d25c78a9b4afa201884836d3ee22d075911783cc0933143d
Stored in directory: /home/dhruv/.cache/pip/wheels/5e/03/1e/e1e954795d6f35dfc7b637fe2277bff021303bd9570ecea653
Building wheel for torch-geometric (setup.py): started
Building wheel for torch-geometric (setup.py): finished with status 'done'
Created wheel for torch-geometric: filename=torch_geometric-1.6.3-py3-none-any.whl size=322718 sha256=25c46ccfc3a092560d35fb7bc961532fc35db2cdc01f6ec465a47048a5b0ddd4
Stored in directory: /home/dhruv/.cache/pip/wheels/9f/98/e2/5e1e57b8ac9f135413e7d3b0399761e9243194864b4ffcf3d7
Building wheel for torch-cluster (setup.py): started
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): still running...
Building wheel for torch-cluster (setup.py): finished with status 'done'
Created wheel for torch-cluster: filename=torch_cluster-1.6.0-cp37-cp37m-linux_x86_64.whl size=1075923 sha256=f28afb2f78e285bd13f6264a5f5b6997c5c61f9e6b036720cc5bc114f9cdf120
Stored in directory: /home/dhruv/.cache/pip/wheels/bc/c7/3e/258dd72b35d7a459264143ad5bfe97b9dc5eef90069ca2f13f
Building wheel for torch-scatter (setup.py): started
Building wheel for torch-scatter (setup.py): still running...
Building wheel for torch-scatter (setup.py): finished with status 'error'
Running setup.py clean for torch-scatter
Building wheel for torch-sparse (setup.py): started
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): still running...
Building wheel for torch-sparse (setup.py): finished with status 'done'
Created wheel for torch-sparse: filename=torch_sparse-0.6.16-cp37-cp37m-linux_x86_64.whl size=1740317 sha256=47ccd7b7a5ce0ade79ea5d4ca660534999a5895a6647c265207bc667b72a7cfa
Stored in directory: /home/dhruv/.cache/pip/wheels/92/8d/17/1517bf0318b8343b665b7aadf906dff4bc8967d82cacc17992
Successfully built future python-louvain pyyaml torch-geometric torch-cluster torch-sparse
Failed to build torch-scatter
Installing collected packages: urllib3, markupsafe, llvmlite, isodate, idna, future, dataclasses, chardet, cached-property, requests, rdflib, python-louvain, numba, jinja2, h5py, googledrivedownloader, ase, torch-spline-conv, torch-sparse, torch-scatter, torch-geometric, torch-cluster, pyyaml
Running setup.py install for torch-scatter: started
Running setup.py install for torch-scatter: still running...
Running setup.py install for torch-scatter: finished with status 'error'
Pip subprocess error:
ERROR: Command errored out with exit status 1:
command: /home/dhruv/miniconda3/envs/confgf/bin/python -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/setup.py'"'"'; __file__='"'"'/tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hm_a50e0
cwd: /tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/
Complete output (285 lines):
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.7
creating build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/segment_coo.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/scatter.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/utils.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/__init__.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/segment_csr.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/placeholder.py -> build/lib.linux-x86_64-3.7/torch_scatter
creating build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/logsumexp.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/std.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/__init__.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/softmax.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
running egg_info
writing torch_scatter.egg-info/PKG-INFO
writing dependency_links to torch_scatter.egg-info/dependency_links.txt
writing requirements to torch_scatter.egg-info/requires.txt
writing top-level names to torch_scatter.egg-info/top_level.txt
reading manifest file 'torch_scatter.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files matching '*' found under directory 'test'
writing manifest file 'torch_scatter.egg-info/SOURCES.txt'
running build_ext
building 'torch_scatter._segment_coo_cpu' extension
creating build/temp.linux-x86_64-3.7
creating build/temp.linux-x86_64-3.7/csrc
creating build/temp.linux-x86_64-3.7/csrc/cpu
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/segment_coo.cpp -o build/temp.linux-x86_64-3.7/csrc/segment_coo.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/cpu/segment_coo_cpu.cpp -o build/temp.linux-x86_64-3.7/csrc/cpu/segment_coo_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
g++ -pthread -shared -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -L/home/dhruv/miniconda3/envs/confgf/lib -Wl,-rpath=/home/dhruv/miniconda3/envs/confgf/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.7/csrc/segment_coo.o build/temp.linux-x86_64-3.7/csrc/cpu/segment_coo_cpu.o -L/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-3.7/torch_scatter/_segment_coo_cpu.so -s
building 'torch_scatter._segment_coo_cuda' extension
creating build/temp.linux-x86_64-3.7/csrc/cuda
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -DWITH_CUDA -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/usr/local/cuda/include -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/segment_coo.cpp -o build/temp.linux-x86_64-3.7/csrc/segment_coo.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -DWITH_CUDA -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/usr/local/cuda/include -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/cpu/segment_coo_cpu.cpp -o build/temp.linux-x86_64-3.7/csrc/cpu/segment_coo_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
/usr/local/cuda/bin/nvcc -DWITH_PYTHON -DWITH_CUDA -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/usr/local/cuda/include -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/) -o build/temp.linux-x86_64-3.7/csrc/cuda/segment_coo_cuda.o -D__CUDA_NO_HALF_OPERATORS__ -D__CUDA_NO_HALF_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options '-fPIC' -O3 --expt-relaxed-constexpr -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=sm_61 -std=c++14
/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/ATen/core/boxing/impl/boxing.h(100): warning #68-D: integer conversion resulted in a change of sign
/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/ATen/core/op_registration/op_whitelist.h(39): warning #68-D: integer conversion resulted in a change of sign
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(70): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (c10::BFloat16 *)
detected during instantiation of "void segment_coo_arg_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, int64_t *, size_t, size_t) [with scalar_t=c10::BFloat16]"
(217): here
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(146): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (c10::BFloat16 *)
detected during instantiation of "void segment_coo_arg_broadcast_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, int64_t *, size_t, size_t, size_t) [with scalar_t=c10::BFloat16]"
(217): here
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(299): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (const c10::BFloat16 *)
detected during instantiation of "void gather_coo_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, size_t, size_t) [with scalar_t=c10::BFloat16]"
(368): here
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(321): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (const c10::BFloat16 *)
detected during instantiation of "void gather_coo_broadcast_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, size_t, size_t, size_t) [with scalar_t=c10::BFloat16]"
(368): here
58 errors detected in the compilation of "csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)".
error: command '/usr/local/cuda/bin/nvcc' failed with exit status 1
----------------------------------------
ERROR: Failed building wheel for torch-scatter
ERROR: Command errored out with exit status 1:
command: /home/dhruv/miniconda3/envs/confgf/bin/python -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/setup.py'"'"'; __file__='"'"'/tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-2zf8xclq/install-record.txt --single-version-externally-managed --compile --install-headers /home/dhruv/miniconda3/envs/confgf/include/python3.7m/torch-scatter
cwd: /tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/
Complete output (285 lines):
running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.7
creating build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/segment_coo.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/scatter.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/utils.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/__init__.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/segment_csr.py -> build/lib.linux-x86_64-3.7/torch_scatter
copying torch_scatter/placeholder.py -> build/lib.linux-x86_64-3.7/torch_scatter
creating build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/logsumexp.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/std.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/__init__.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
copying torch_scatter/composite/softmax.py -> build/lib.linux-x86_64-3.7/torch_scatter/composite
running egg_info
writing torch_scatter.egg-info/PKG-INFO
writing dependency_links to torch_scatter.egg-info/dependency_links.txt
writing requirements to torch_scatter.egg-info/requires.txt
writing top-level names to torch_scatter.egg-info/top_level.txt
reading manifest file 'torch_scatter.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files matching '*' found under directory 'test'
writing manifest file 'torch_scatter.egg-info/SOURCES.txt'
running build_ext
building 'torch_scatter._segment_coo_cpu' extension
creating build/temp.linux-x86_64-3.7
creating build/temp.linux-x86_64-3.7/csrc
creating build/temp.linux-x86_64-3.7/csrc/cpu
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/segment_coo.cpp -o build/temp.linux-x86_64-3.7/csrc/segment_coo.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/cpu/segment_coo_cpu.cpp -o build/temp.linux-x86_64-3.7/csrc/cpu/segment_coo_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
g++ -pthread -shared -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -L/home/dhruv/miniconda3/envs/confgf/lib -Wl,-rpath=/home/dhruv/miniconda3/envs/confgf/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.7/csrc/segment_coo.o build/temp.linux-x86_64-3.7/csrc/cpu/segment_coo_cpu.o -L/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-3.7/torch_scatter/_segment_coo_cpu.so -s
building 'torch_scatter._segment_coo_cuda' extension
creating build/temp.linux-x86_64-3.7/csrc/cuda
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -DWITH_CUDA -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/usr/local/cuda/include -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/segment_coo.cpp -o build/temp.linux-x86_64-3.7/csrc/segment_coo.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
gcc -pthread -B /home/dhruv/miniconda3/envs/confgf/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_PYTHON -DWITH_CUDA -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/usr/local/cuda/include -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/cpu/segment_coo_cpu.cpp -o build/temp.linux-x86_64-3.7/csrc/cpu/segment_coo_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
cc1plus: warning: command-line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
/usr/local/cuda/bin/nvcc -DWITH_PYTHON -DWITH_CUDA -Icsrc -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/torch/csrc/api/include -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/TH -I/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/THC -I/usr/local/cuda/include -I/home/dhruv/miniconda3/envs/confgf/include/python3.7m -c csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/) -o build/temp.linux-x86_64-3.7/csrc/cuda/segment_coo_cuda.o -D__CUDA_NO_HALF_OPERATORS__ -D__CUDA_NO_HALF_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options '-fPIC' -O3 --expt-relaxed-constexpr -DTORCH_API_INCLUDE_EXTENSION_H -DTORCH_EXTENSION_NAME=_segment_coo_cuda -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=sm_61 -std=c++14
/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/ATen/core/boxing/impl/boxing.h(100): warning #68-D: integer conversion resulted in a change of sign
/home/dhruv/miniconda3/envs/confgf/lib/python3.7/site-packages/torch/include/ATen/core/op_registration/op_whitelist.h(39): warning #68-D: integer conversion resulted in a change of sign
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(217): error: no instance of overloaded function "at::Tensor::div_" matches the argument list
argument types are: (at::Tensor, const char [6])
object type is: at::Tensor
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(70): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (c10::BFloat16 *)
detected during instantiation of "void segment_coo_arg_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, int64_t *, size_t, size_t) [with scalar_t=c10::BFloat16]"
(217): here
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(146): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (c10::BFloat16 *)
detected during instantiation of "void segment_coo_arg_broadcast_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, int64_t *, size_t, size_t, size_t) [with scalar_t=c10::BFloat16]"
(217): here
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(299): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (const c10::BFloat16 *)
detected during instantiation of "void gather_coo_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, size_t, size_t) [with scalar_t=c10::BFloat16]"
(368): here
csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)(321): error: no instance of overloaded function "__ldg" matches the argument list
argument types are: (const c10::BFloat16 *)
detected during instantiation of "void gather_coo_broadcast_kernel(const scalar_t *, at::cuda::detail::TensorInfo<int64_t, int>, scalar_t *, size_t, size_t, size_t) [with scalar_t=c10::BFloat16]"
(368): here
58 errors detected in the compilation of "csrc/cuda/[segment_coo_cuda.cu](http://segment_coo_cuda.cu/)".
error: command '/usr/local/cuda/bin/nvcc' failed with exit status 1
----------------------------------------
ERROR: Command errored out with exit status 1: /home/dhruv/miniconda3/envs/confgf/bin/python -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/setup.py'"'"'; __file__='"'"'/tmp/pip-install-uny9vo1m/torch-scatter_9fc63357621946e09c129266a2493a1f/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-2zf8xclq/install-record.txt --single-version-externally-managed --compile --install-headers /home/dhruv/miniconda3/envs/confgf/include/python3.7m/torch-scatter Check the logs for full command output.
failed
CondaEnvException: Pip failed
