Graphtyper for calling human X-chromosome variants

[Sirtx]

Hi,

I'd like to ask if Graptyper can reliably call X-chromosome variants on GRCh38-aligned BAMs, and if there's any parameters I should use or something else to note? I.e. with GATK, user should provide whether sample is female or male to call the X-chromosome as diploid/haploid, and also coordinates of pseudoautosomal regions.