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Published 20 hours ago • verified publisher icon DataBiosphere

toil + MPI thoughts

Open mr-c opened this issue 4 years ago • 2 comments

Follow on from https://github.com/DataBiosphere/toil/issues/3517#issuecomment-825609742

Should the Toil batch backends have a concept of requesting multiple nodes? Or shall we keep the current hack mentioned above?

┆Issue is synchronized with this Jira Story ┆Issue Number: TOIL-884

mr-c avatar Apr 27 '21 14:04 mr-c

One thing I should add, we need a better way of testing SLURM with MPI in toil.

DailyDreaming avatar Apr 27 '21 15:04 DailyDreaming

Any chance this will be picked up as a feature request any time soon? The details of the current "problem" are in the comment referenced above.

gmloose avatar May 23 '24 15:05 gmloose