Danko-Lab
I am unable to successfully install this R package
Hello, I have tried various methods to install this R package but have failed. Due to network limitations, I am unable to use the install_github ("Danko Lab/BayesPrism/BayesPrism") code. I directly extracted the zip file downloaded from GitHub and tried to install it locally. The rstudio error message shows: Failed to install 'BayesPrism main. zip' from local: Do not appear to be an R package (no description), is there a solution? Thank you very much
You may first manually install the dependency packages in the following list: Depends: R (>= 2.6), snowfall, NMF Imports: gplots, stats, utils, scran, BiocParallel, Matrix
, and then in the command line, do: (make sure you are in the correct directory and you have unzipped the file) R CMD INSTALL BayesPrism.
Try googling tutorials on R package installation for details if needed.
On Tue, Aug 20, 2024 at 11:14 PM ksdonaldduck @.***> wrote:
Hello, I have tried various methods to install this R package but have failed. Due to network limitations, I am unable to use the install_github ("Danko Lab/BayesPrism/BayesPrism") code. I directly extracted the zip file downloaded from GitHub and tried to install it locally. The rstudio error message shows: Failed to install 'BayesPrism main. zip' from local: Do not appear to be an R package (no description), is there a solution? Thank you very much
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Thank you for your answer. After installing the dependency package, I have successfully installed the R package by changing the network environment. I am not familiar with the R CMD, so I did not try it. Thank you very much