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Cytnx will cause kernal crashing when using matplotlib

Open j9263178 opened this issue 2 years ago • 11 comments

Running the following code in a jupyter notebook will make the kernal crashing

import cytnx
import matplotlib.pyplot as plt
plt.plot([1,2,3])

j9263178 avatar Aug 27 '23 11:08 j9263178

What's your setting? Inline?

kaihsin avatar Aug 29 '23 16:08 kaihsin

I suspect that this is caused by mkl ilp64

What’s inline?

Kai-Hsin Wu @.***>於 2023年8月30日 週三,上午12:11寫道:

What's your setting? Inline?

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jeffry1829 avatar Aug 29 '23 16:08 jeffry1829

What's your setting? Inline?

Yes, running with %matplotlib inline will reproduce the bug.

j9263178 avatar Aug 29 '23 19:08 j9263178

How about on terminal? Does it break?

kaihsin avatar Aug 29 '23 21:08 kaihsin

I can't reproduce this? whats your conda packages settings

kaihsin avatar Aug 30 '23 07:08 kaihsin

image

kaihsin avatar Aug 30 '23 08:08 kaihsin

mamba                     1.5.0           py311h3072747_0    conda-forge
matplotlib                3.7.2                    pypi_0    pypi
ncurses                   6.4                  h6a678d5_0  
numpy                     1.25.2                   pypi_0    pypi
openssl                   3.1.2                hd590300_0    conda-forge
packaging                 23.0            py311h06a4308_0  
pcre2                     10.37                he7ceb23_1  
pillow                    10.0.0                   pypi_0    pypi
pip                       23.1.2          py311h06a4308_0  
pluggy                    1.0.0           py311h06a4308_1  
pybind11-abi              4                    hd3eb1b0_1  
pycosat                   0.6.4           py311h5eee18b_0  
pycparser                 2.21               pyhd3eb1b0_0  
pyopenssl                 23.2.0          py311h06a4308_0  
pyparsing                 3.0.9                    pypi_0    pypi
pysocks                   1.7.1           py311h06a4308_0  
python                    3.11.4               h955ad1f_0  
python-dateutil           2.8.2                    pypi_0    pypi
python_abi                3.11                    2_cp311    conda-forge
readline                  8.2                  h5eee18b_0  
reproc                    14.2.4               h295c915_1  
reproc-cpp                14.2.4               h295c915_1  
requests                  2.31.0          py311h06a4308_0  
ruamel.yaml               0.17.21         py311h5eee18b_0  
setuptools                67.8.0          py311h06a4308_0  
six                       1.16.0             pyhd3eb1b0_1  
sqlite                    3.41.2               h5eee18b_0  
tk                        8.6.12               h1ccaba5_0  
toolz                     0.12.0          py311h06a4308_0  
tqdm                      4.65.0          py311h92b7b1e_0  
tzdata                    2023c                h04d1e81_0  
urllib3                   1.26.16         py311h06a4308_0  
wheel                     0.38.4          py311h06a4308_0  
xz                        5.4.2                h5eee18b_0  
yaml-cpp                  0.7.0                h295c915_1  
zlib                      1.2.13               hd590300_5    conda-forge
zstandard                 0.19.0          py311h5eee18b_0  
zstd                      1.5.5                hc292b87_0 

jeffry1829 avatar Aug 30 '23 09:08 jeffry1829

Try to update all deps to condaforge

On Wed, Aug 30, 2023, 05:40 jeffry1829 @.***> wrote:

[image: image] https://user-images.githubusercontent.com/21331401/264280485-111b37ae-d58d-4fdb-83da-619703487566.png

mamba 1.5.0 py311h3072747_0 conda-forge matplotlib 3.7.2 pypi_0 pypi ncurses 6.4 h6a678d5_0 numpy 1.25.2 pypi_0 pypi openssl 3.1.2 hd590300_0 conda-forge packaging 23.0 py311h06a4308_0 pcre2 10.37 he7ceb23_1 pillow 10.0.0 pypi_0 pypi pip 23.1.2 py311h06a4308_0 pluggy 1.0.0 py311h06a4308_1 pybind11-abi 4 hd3eb1b0_1 pycosat 0.6.4 py311h5eee18b_0 pycparser 2.21 pyhd3eb1b0_0 pyopenssl 23.2.0 py311h06a4308_0 pyparsing 3.0.9 pypi_0 pypi pysocks 1.7.1 py311h06a4308_0 python 3.11.4 h955ad1f_0 python-dateutil 2.8.2 pypi_0 pypi python_abi 3.11 2_cp311 conda-forge readline 8.2 h5eee18b_0 reproc 14.2.4 h295c915_1 reproc-cpp 14.2.4 h295c915_1 requests 2.31.0 py311h06a4308_0 ruamel.yaml 0.17.21 py311h5eee18b_0 setuptools 67.8.0 py311h06a4308_0 six 1.16.0 pyhd3eb1b0_1 sqlite 3.41.2 h5eee18b_0 tk 8.6.12 h1ccaba5_0 toolz 0.12.0 py311h06a4308_0 tqdm 4.65.0 py311h92b7b1e_0 tzdata 2023c h04d1e81_0 urllib3 1.26.16 py311h06a4308_0 wheel 0.38.4 py311h06a4308_0 xz 5.4.2 h5eee18b_0 yaml-cpp 0.7.0 h295c915_1 zlib 1.2.13 hd590300_5 conda-forge zstandard 0.19.0 py311h5eee18b_0 zstd 1.5.5 hc292b87_0

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kaihsin avatar Aug 30 '23 09:08 kaihsin

Try to update all deps to condaforge

I should've install all packages in conda-forge, don't know why it show pypi, I'll try

jeffry1829 avatar Aug 30 '23 09:08 jeffry1829

Sorry I give the wrong environment's list, here's the correct one: https://pastebin.com/s4g4D6XS

jeffry1829 avatar Aug 30 '23 11:08 jeffry1829

I still cannot reproduce the bug. Does this only happen in notebook? or in terminal as well?

kaihsin avatar Sep 04 '23 18:09 kaihsin