MRI-Reconstruction
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The problem about subsample
Thank you for showing such excellent work,but I still have some problems about subsample the data.
Firstly, I don't understand the comments of " #accounts for the double-counted lines" and the meaning for the variable of mod_low_freq_percent?
secondly, according to the paper ,we need 25% k-space data ,why the line about"
for i in range(int(start), int(end)):
subshift[i] = tshift[i]"
did not need this condition "if i % substep == 0:"
I hope you answer, Thanks
To get subsampled images, we used every 4th line of an original MR image. Training a network with this uniform sampling showed anterior-posterior uncertainty. Adding a small amount of extra low-frequency data resolved this issue.
the mod_low_freq_percent just helps to keep track of how much data is actually in the subsampled image. Every 4th line in extra low-frequency band would be double counted without a correction.
Check out the paper we wrote on the system @ https://corey-zumar.github.io/submrine/
The subsampling is just a way to simulate a lower resolution image. The optimal setup will likely depend on the equipment, and anatomy.
i am pretty sorry, after reading your paper , I still cannot understand why " Every 4th line in extra low-frequency band would be double counted"I
` #Subsampler, #accounts for the double-counted lines mod_low_freq_percent = 1.0 / float( substep) * low_freq_percent + low_freq_percent
start = len(tshift) / 2 - int(
mod_low_freq_percent * float(len(tshift)))
end = len(tshift) / 2 + int(mod_low_freq_percent * float(len(tshift)))
for i in range(0, start):
if i % substep == 0:
subshift[i] = tshift[i]
for i in range(start, end):
subshift[i] = tshift[i]
for i in range(end, len(tshift)):
if i % substep == 0:
subshift[i] = tshift[i]`
please teach me , from the above codes ,how can i calculate the 4% low-frequency and 25% k-space data