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Can only map two cell types when plotting DE genes

Open whitneyt1 opened this issue 2 years ago • 0 comments

Hello!

When plotting the DE genes found with DEG() for multiple subtypes, I receive the following error `>res_cat<-FindLR(deg_tumor, data_2=c(deg_fibro,deg_tcells), datatype='DEG',comm_type=comm_type)

Error in gene_list_2[, c("gene", "logFC", "q.value", "cell_type")] : incorrect number of dimensions`

Is it only possible to plot two cell subtypes at a time? The paper example has multiple subtypes.

Thanks! Screen Shot 2022-03-07 at 5 14 01 PM

whitneyt1 avatar Mar 08 '22 01:03 whitneyt1