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ipyvolume visualization (static timecorr visualization)

Open lucywowen opened this issue 6 years ago • 2 comments

Create a 3D correlation matrix (feature x feature x volume) and change the opacity to increase with stronger (absolute value) correlations.

If the features are voxels, you can arrange them to correspond with functional groups. Then on the side (corresponding to the time axis) display a histogram showing when different stimuli are presented. It would be interesting to see blobby structures emerge at these times.

lucywowen avatar Aug 13 '18 20:08 lucywowen

Implemented the beginnings of this idea in this notebook

screen shot 2018-08-14 at 10 37 31 pm

jeremymanning avatar Aug 15 '18 02:08 jeremymanning

  • add a stationary parameter (for variance across time for each cell)
  • need to tag Aaron Lee in this!

lucywowen avatar Feb 13 '20 21:02 lucywowen