Spo2_evaluation

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Dataset structure

3

Hi all, Since we should soon get the dataset up and running I'd like to talk about how we plan to provide it to users especially since students are going...

MalcolmMielle

YoniSchirris

change number of videos in dataset class

3

`self.number_of_videos = self.sample_data['sample_id'].max()` gives `number_of_videos-1` instead, use `len(sample_data.index)` as given in [here](https://stackoverflow.com/questions/15943769/how-do-i-get-the-row-count-of-a-pandas-dataframe)

YoniSchirris

Remove VideoDataAcquisition.java?

1

I notice there's a videodatacquisition.java file in spo2evaluation/misc. This seems unrelated to this project, should it be in here?

YoniSchirris

Green ppg is equal to 0

7

In Nemcova's method, the green ppg signal is used. However, when extracting the green ppg signal, the signal is flat and 0. We need to investigate if there is a...

MalcolmMielle

THREAD: Exploratory analysis

2

This issue can serve as as a thread for exploratory analysis on `sample_data/` and `nemcova_data`

gianlucatruda

Finalize healthwatcher

1

- [ ] add a regression fit - [ ] allow for passing several videos

YoniSchirris

- [ ] preprocessing - Using as few pixels from the video to do prediction (which channels? Which part of the image? e.g. using gradient to find if phone is...

YoniSchirris

So far we just have a single dummy test. We need proper tests for our functions and submodules so we don't break things when developing.

gianlucatruda

General refactoring and cleanup of the repo

7

TODO: - [x] Update requirements.txt (see PR #22) - [ ] Improved documentation in data_loader and preprocessing - [x] Add a proper .gitignore file (see PR #22) - [x] Structure...

gianlucatruda