The Triticeae Toolbox

I found that if I uninstall 3 openblas libraries that it fixes the errors running GWAS in rrBLUP.

Also doesn't work with R-4.2.1 which has updated LAPACK and fixed OpenBLAS. Temporary fix is to remove openBLAS packages, apt-get remove libopenblas0, but probably needs to recompile Rlib

Image upload via Field Book has errors. I noticed a permission problem on table then no md5sum set for image_id in Image.pm.

@timparsons Can you break this pull request into smaller chunks so it is easier validate?

Is it possible to upgrade to a new version of jQuery incrementally (page by page)? It seems too big of a project to upgrade all the code at once to...

Here are pages with upgrade notes https://jquery.com/upgrade-guide/1.9/ https://jquery.com/upgrade-guide/3.0/ I found the following important changes jQuery 1.9 deprecated the .attr() in most cases jQuery 3 changed the jqXHR return from jQuery.ajax(),...

I looked at three tools to give statistics for vcf files. 1. vcftools - only very basic summary 2. bcftools - a little better still not much detail 3. rtg-tools...

This is still a problem. Is anyone working on it?

In theory that would be great but it seems like it would take too long. For each genotype protocol there would be a different number of accessions found. Could it...

Here are feature that our users have requested for genotype downloads 1. indicate to user if the download is too large and will likely timeout 2. download genotype data for...