shiver

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Issue with Initialization using ExampleInput

4

Hi, I have been having trouble with using the code and trying to get it to run with python 3.10.0. I initially installed just python 3.10 but encountered errors saying...

Kurtman85

lithomson

Hi Chris To help a bit with maintaining shiver (and I also I don t want to replace python with python2 in the shebangs every time I git pull), I...

olli0601

Simplify deployment - provide Docker container?

1

Me and a colleague had some troubles installing and getting this to work, going through the classic dependency hell. The VirtualBox image functions nicely, but we cannot use it in...

Masterxilo

ChrisHIV

Update to shiver to include CodonCorrection.sh and surrounding scripts, which correct genes from within the shiver remap consensus files, although are not yet integrated into a final full genome product....

susannah-b