MEGAN output to microeco

[spe238]

I have a metatrascnriptomics dataset that I extracted from MEGAN. It is in a wide format and has taxonomic units in rows, and samples in columns. I could easily transform it into a long format, and also add more metadata, if needed. Now, I wonder, if there is an easy way to import this kind of dataset into microeco.

[ChiLiubio]

Hi. The import functions are all in the file2meco package (https://github.com/ChiLiubio/file2meco). However, there are currently no mature functions available to directly import MEGAN results into a microtable object. We will consider adding such functions. Thanks.

Best, Chi