DPARSF
DPARSF copied to clipboard
Index exceeds the number of array elements. Index must not exceed 0
I am having this issue and I wonder what the problem might be, I tried testing this on a single subject
In ver (line 56) In DPARSFA In gui_mainfcn (line 220) In DPARSFA In DPARSF_main>pushbutton_DPARSFA_Callback (line 98) In gui_mainfcn (line 95) In DPARSF_main (line 42) In matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)DPARSF_main('pushbutton_DPARSFA_Callback',hObject,eventdata,guidata(hObject)) Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead.
In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA In DPARSFA In gui_mainfcn (line 220) In DPARSFA In DPARSF_main>pushbutton_DPARSFA_Callback (line 98) In gui_mainfcn (line 95) In DPARSF_main (line 42) In matlab.graphics.internal.figfile.FigFile/read>@(hObject,eventdata)DPARSF_main('pushbutton_DPARSFA_Callback',hObject,eventdata,guidata(hObject)) Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead. In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA In DPARSFA In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead. In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA In DPARSFA In DPARSFA In gui_mainfcn (line 95) In DPARSFA
IsMultipleLabel is set to 1: There are multiple labels in the ROI mask file. Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead.
In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead. In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead. In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead. In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA In DPARSFA In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: File: DPARSFA_run.m Line: 751 Column: 29 The temporary variable 'SliceOrder' will be cleared at the beginning of each iteration of the parfor-loop. If 'SliceOrder' is used before it is set, a runtime error will occur. For more information, see Parallel for Loops in MATLAB, "Uninitialized Temporaries". In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: File: DPARSFA_run.m Line: 1131 Column: 17 The temporary variable 'RefFile' will be cleared at the beginning of each iteration of the parfor-loop. If 'RefFile' is used before it is set, a runtime error will occur. For more information, see Parallel for Loops in MATLAB, "Uninitialized Temporaries". In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: File: DPARSFA_run.m Line: 2987 Column: 13 The temporary variable 'DirImg' will be cleared at the beginning of each iteration of the parfor-loop. If 'DirImg' is used before it is set, a runtime error will occur. For more information, see Parallel for Loops in MATLAB, "Uninitialized Temporaries". In DPARSFA In gui_mainfcn (line 95) In DPARSFA Warning: File: DPARSFA_run.m Line: 4711 Column: 17 The temporary variable 'DirImg' will be cleared at the beginning of each iteration of the parfor-loop. If 'DirImg' is used before it is set, a runtime error will occur. For more information, see Parallel for Loops in MATLAB, "Uninitialized Temporaries". In DPARSFA In gui_mainfcn (line 95) In DPARSFA Compression will be faster with 'pigz' installed http://macappstore.org/pigz/ Chris Rorden's dcm2niiX version v1.0.20201102 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0 x86-64 (64-bit MacOS) Found 240 DICOM file(s) UINT16->INT16 Future release will change default. github.com/rordenlab/dcm2niix/issues/338 Convert 240 DICOM as /Users/reubenaddison/Downloads/DemoData/DemoRaw/DemoData/FunImg/Sub_001/Sub_001_ge_func_31x31x30_240_RS_20071016110634_4 (64x64x33x240) Conversion required 0.213822 seconds (0.109505 for core code). Converting Functional Images:Sub_001 OK Compression will be faster with 'pigz' installed http://macappstore.org/pigz/ Chris Rorden's dcm2niiX version v1.0.20201102 (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0 x86-64 (64-bit MacOS) Found 128 DICOM file(s) UINT16->INT16 Future release will change default. github.com/rordenlab/dcm2niix/issues/338 Convert 128 DICOM as /Users/reubenaddison/Downloads/DemoData/DemoRaw/DemoData/T1Img/Sub_001/Sub_001_t1_mprage_sag_20071016110634_6 (256x256x128x1) Cropping from slice 51 to 220 (of 256) Conversion required 0.197030 seconds (0.153269 for core code). Converting T1 Images:Sub_001 OK Removing First 10 Time Points: Sub_001 OK Using slice timing information from DICOM BIDS information: Sub_001. Slice Timing Setup:Sub_001 OK Initialising batch system... done.
14-Apr-2023 08:48:43 - Running job #1
14-Apr-2023 08:48:43 - Running 'Slice Timing'
SPM12: spm_slice_timing (v6130) 08:48:43 - 14/04/2023
Number of slices is... : 33 Time to Repeat (TR) is... : 2 Parameters are specified as... : slice times (ms) Completed : 08:48:51 - 14/04/2023 14-Apr-2023 08:48:51 - Done 'Slice Timing' 14-Apr-2023 08:48:51 - Done
Moving Slice Timing Corrected Files:Sub_001 OK Realign Setup:Sub_001 OK
14-Apr-2023 08:48:52 - Running job #1
14-Apr-2023 08:48:52 - Running 'Realign: Estimate & Reslice'
SPM12: spm_realign (v7141) 08:48:52 - 14/04/2023
Completed : 08:49:13 - 14/04/2023
SPM12: spm_reslice (v7141) 08:49:13 - 14/04/2023
Completed : 08:49:26 - 14/04/2023 14-Apr-2023 08:49:26 - Done 'Realign: Estimate & Reslice' 14-Apr-2023 08:49:26 - Done
Moving Head Motion Corrected Files:Sub_001 OK Reorienting T1 Image Interactively for Sub_001:
Reorienting T1 Image Interactively for Sub_001: OK Reorienting Functional Images Interactively for Sub_001:
Reorienting Functional Images Interactively for Sub_001: OK Warning: Directory already exists.
In DPARSFA_run (line 1380) In DPARSFA In gui_mainfcn (line 95) In DPARSFA Apply Reorient Mats to functional images for Sub_001: OK Bet begin... /bin/bash: docker: command not found /bin/bash: docker: command not found Bet finished Warning: Support for ver('distcomp') will be removed in a future release. Use ver('parallel') instead. In ver>locGetSingleToolboxInfo (line 283) In ver (line 56) In DPARSFA_run (line 1665) In DPARSFA In gui_mainfcn (line 95) In DPARSFA Copying T1 image Files:Sub_001 OK Error using DPARSFA_run Index exceeds the number of array elements. Index must not exceed 0.
Error in DPARSFA
Error in gui_mainfcn (line 95) feval(varargin{:});
Error in DPARSFA
Error while evaluating UIControl Callback.