python-bioformats
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Update to latest java version?
The bioformats
java package was recently updated to properly handle certain .dm4
files. My understanding is that this python wrapper package (specifically the .jar
file) also needs to be updated before it can implement this new functionality, as suggested by the most recent comment here:
https://forum.image.sc/t/gatan-dm4-files-wont-open/55627/13
I'm also experiencing a problem that I think will be solved by updating the .jar
version.
I would be great if there was an option to install bioformats separately and we can specify which jars python-bioformats should use. That way we can change bioformats version without any code changes to python-bioformats. (I'm not sure if that's feasible because I don't know how much python-bioformats code is specific to a given bioformats version)