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display image shows evenly sized images on different scales

Open alxndrkalinin opened this issue 2 years ago • 2 comments

Results window shows side-to-side original image and processed image on different scales, although there are the same size.

To Reproduce Steps to reproduce the behavior:

  1. Open 3d_monolayer pipeline
  2. Add images
  3. In test mode, run first step
  4. Display window opens with unevenly sized images

Expected both original and processed images to be displayed on the same scale.

Screenshots Screen Shot 2022-06-24 at 3 27 19 PM

Desktop (please complete the following information):

  • OS: MacOS 10.15.7
  • CellProfiler Version 4.2.1
  • Downloaded from the website
  • Java 1.8.0_192

alxndrkalinin avatar Jun 24 '22 19:06 alxndrkalinin

Hmmm, I can't reproduce, either in 4.2.1 built or current master (L&R), albeit MacOS 11.6 . Do you see this in all 3D displays, or just RescaleIntensity in particular?

image

bethac07 avatar Jul 16 '22 14:07 bethac07

It's present in some displays, but not always.

I did first few steps of the pipeliene and it seems like it depends on whether you're running it in test or analysis mode (perhaps, related to how windows are created?).

Step Displayed correctly, test mode Displayed correctly, analysis
RescaleIntensity #5 :x: :x:
Resize #6 :x: :x:
MedialFilter #7 :x:
Threshold #8 :x:
RemoveHoles #9 :x:
Watershed #10 :x:
ResizeObjects #11 :x:
ErodeObjects #12 :x: :x:

Steps #5 to #11 in test mode test_steps

Steps #5 to #11 in analysis mode analyze_images

alxndrkalinin avatar Jul 18 '22 18:07 alxndrkalinin