CellProfiler-plugins
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Update requirements.txt to include cellpose
@bethac07 @alicelucas this was necessary because without cellpose
installed, other CellProfiler-plugins
break (i.e. RunImageJScript
) because the runcellpose.py
setup fails.
Hmmm, each plugin should be independent in its loading, and I can't confirm either on my system - I had both modules importable, pip uninstalled cellpose, and it stopped loading in but RunImageJ did not...
@bethac07 thanks for looking at it. I was getting runtime errors from pyimagej that seemed to go away after installing cellpose, but I can't reproduce either now so maybe it was a RunImageJScript configuration issue. Sorry for the distraction!
Closing this PR because we are currently overhauling how we handle dependencies (FYI @callum-jpg, in case this helps you)